Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shroom1Q5SX79 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.45■□□□□ 0.06
Shroom1Q5SX79 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.45■□□□□ 0.06
Shroom1Q5SX79 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Shroom1Q5SX79 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Gm9719-201ENSMUST00000162765 543 ntBASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Gm44344-201ENSMUST00000200287 129 ntBASIC15.43■□□□□ 0.06
Shroom1Q5SX79 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Gm7775-201ENSMUST00000218871 853 ntBASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.43■□□□□ 0.06
Shroom1Q5SX79 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom1Q5SX79 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom1Q5SX79 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom1Q5SX79 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom1Q5SX79 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom1Q5SX79 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom1Q5SX79 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom1Q5SX79 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Shroom1Q5SX79 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.42■□□□□ 0.06
Shroom1Q5SX79 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom1Q5SX79 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom1Q5SX79 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom1Q5SX79 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom1Q5SX79 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.42■□□□□ 0.06
Shroom1Q5SX79 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Shroom1Q5SX79 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.42■□□□□ 0.06
Shroom1Q5SX79 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shroom1Q5SX79 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Gm13464-201ENSMUST00000119418 935 ntBASIC15.41■□□□□ 0.06
Shroom1Q5SX79 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms