Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Gm5566-201ENSMUST00000116118 459 ntBASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Gm6222-201ENSMUST00000120787 396 ntBASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps54Q5SPW0 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps54Q5SPW0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps54Q5SPW0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps54Q5SPW0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps54Q5SPW0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Vps54Q5SPW0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps54Q5SPW0 Gm10275-202ENSMUST00000168697 495 ntBASIC17.4■□□□□ 0.38
Vps54Q5SPW0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps54Q5SPW0 Gm27631-201ENSMUST00000184163 466 ntBASIC17.4■□□□□ 0.38
Vps54Q5SPW0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.4■□□□□ 0.38
Vps54Q5SPW0 Gm10275-201ENSMUST00000092620 635 ntBASIC17.4■□□□□ 0.38
Vps54Q5SPW0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Vps54Q5SPW0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps54Q5SPW0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps54Q5SPW0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps54Q5SPW0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Vps54Q5SPW0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps54Q5SPW0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Vps54Q5SPW0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps54Q5SPW0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps54Q5SPW0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Gm27533-201ENSMUST00000183800 152 ntBASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Gm17837-201ENSMUST00000186435 985 ntBASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Gm10576-201ENSMUST00000191927 825 ntBASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Gm6888-201ENSMUST00000221983 706 ntBASIC17.39■□□□□ 0.37
Vps54Q5SPW0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps54Q5SPW0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps54Q5SPW0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.38■□□□□ 0.37
Vps54Q5SPW0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps54Q5SPW0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps54Q5SPW0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps54Q5SPW0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Vps54Q5SPW0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps54Q5SPW0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Vps54Q5SPW0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Vps54Q5SPW0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Vps54Q5SPW0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.38■□□□□ 0.37
Vps54Q5SPW0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.38■□□□□ 0.37
Vps54Q5SPW0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps54Q5SPW0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.38■□□□□ 0.37
Vps54Q5SPW0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps54Q5SPW0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps54Q5SPW0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms