Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5d-4Q5R1F6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Gm44492-201ENSMUST00000197012 141 ntBASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Gm2451-201ENSMUST00000199447 999 ntBASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Gm10290-201ENSMUST00000200451 999 ntBASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Gm18206-201ENSMUST00000207027 926 ntBASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav5d-4Q5R1F6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav5d-4Q5R1F6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms