Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.03■□□□□ -0
Trim80Q3V061 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trim80Q3V061 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Gm25406-201ENSMUST00000157599 105 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Gm23547-201ENSMUST00000158210 271 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.03■□□□□ -0
Trim80Q3V061 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.03■□□□□ -0
Trim80Q3V061 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Gm8825-201ENSMUST00000182565 998 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Gm4518-201ENSMUST00000182638 718 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Gm6550-201ENSMUST00000187574 993 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.03■□□□□ -0
Trim80Q3V061 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.03■□□□□ -0
Trim80Q3V061 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trim80Q3V061 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trim80Q3V061 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trim80Q3V061 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim80Q3V061 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim80Q3V061 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Trim80Q3V061 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim80Q3V061 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim80Q3V061 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim80Q3V061 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trim80Q3V061 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim80Q3V061 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.02■□□□□ -0
Trim80Q3V061 Gm14722-201ENSMUST00000118943 689 ntBASIC15.02■□□□□ -0
Trim80Q3V061 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.02■□□□□ -0
Trim80Q3V061 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim80Q3V061 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim80Q3V061 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim80Q3V061 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.02■□□□□ -0
Trim80Q3V061 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.02■□□□□ -0
Trim80Q3V061 Gm6089-201ENSMUST00000197666 938 ntBASIC15.02■□□□□ -0
Trim80Q3V061 Gm7506-201ENSMUST00000207758 815 ntBASIC15.02■□□□□ -0
Trim80Q3V061 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim80Q3V061 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim80Q3V061 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim80Q3V061 Gm15590-201ENSMUST00000078419 552 ntBASIC15.02■□□□□ -0
Trim80Q3V061 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim80Q3V061 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim80Q3V061 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim80Q3V061 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim80Q3V061 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.02□□□□□ -0.01
Trim80Q3V061 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim80Q3V061 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim80Q3V061 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim80Q3V061 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim80Q3V061 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim80Q3V061 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim80Q3V061 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Trim80Q3V061 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim80Q3V061 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim80Q3V061 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.02□□□□□ -0.01
Trim80Q3V061 Acot6-202ENSMUST00000222921 3622 ntBASIC15.02□□□□□ -0.01
Trim80Q3V061 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim80Q3V061 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.01□□□□□ -0.01
Trim80Q3V061 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Trim80Q3V061 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trim80Q3V061 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim80Q3V061 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim80Q3V061 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim80Q3V061 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trim80Q3V061 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim80Q3V061 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim80Q3V061 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim80Q3V061 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim80Q3V061 Gm12260-201ENSMUST00000122447 411 ntBASIC15.01□□□□□ -0.01
Trim80Q3V061 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.01□□□□□ -0.01
Trim80Q3V061 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Trim80Q3V061 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.01□□□□□ -0.01
Trim80Q3V061 Gm43575-201ENSMUST00000196420 516 ntBASIC15.01□□□□□ -0.01
Trim80Q3V061 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim80Q3V061 Gm9172-201ENSMUST00000212092 954 ntBASIC15.01□□□□□ -0.01
Trim80Q3V061 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.01□□□□□ -0.01
Trim80Q3V061 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim80Q3V061 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim80Q3V061 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim80Q3V061 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim80Q3V061 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim80Q3V061 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim80Q3V061 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim80Q3V061 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms