Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Gm23931-201ENSMUST00000103842 109 ntBASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Gm4804-201ENSMUST00000182234 999 ntBASIC14.49□□□□□ -0.09
Fam196aQ3USH1 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Gm21470-201ENSMUST00000187680 696 ntBASIC14.49□□□□□ -0.09
Fam196aQ3USH1 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.49□□□□□ -0.09
Fam196aQ3USH1 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Gm3961-201ENSMUST00000204425 994 ntBASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Gm18054-201ENSMUST00000207539 555 ntBASIC14.49□□□□□ -0.09
Fam196aQ3USH1 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fam196aQ3USH1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Gm8749-201ENSMUST00000117737 331 ntBASIC14.48□□□□□ -0.09
Fam196aQ3USH1 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Gm4857-201ENSMUST00000192718 785 ntBASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Gm3786-201ENSMUST00000202659 378 ntBASIC14.48□□□□□ -0.09
Fam196aQ3USH1 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fam196aQ3USH1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Fam196aQ3USH1 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Gm27514-201ENSMUST00000183692 110 ntBASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Olfr286-202ENSMUST00000205305 969 ntBASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Gm5425-201ENSMUST00000214125 459 ntBASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fam196aQ3USH1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms