Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Mir3547-201ENSMUST00000175461 88 ntBASIC17■□□□□ 0.31
Col5a2Q3U962 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col5a2Q3U962 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17■□□□□ 0.31
Col5a2Q3U962 Gm19309-201ENSMUST00000218295 205 ntBASIC17■□□□□ 0.31
Col5a2Q3U962 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col5a2Q3U962 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Col5a2Q3U962 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Col5a2Q3U962 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col5a2Q3U962 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Col5a2Q3U962 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col5a2Q3U962 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col5a2Q3U962 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17■□□□□ 0.31
Col5a2Q3U962 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col5a2Q3U962 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Col5a2Q3U962 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col5a2Q3U962 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col5a2Q3U962 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17■□□□□ 0.31
Col5a2Q3U962 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col5a2Q3U962 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Gm44608-201ENSMUST00000206827 855 ntBASIC16.99■□□□□ 0.31
Col5a2Q3U962 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Gm22018-201ENSMUST00000104357 131 ntBASIC16.99■□□□□ 0.31
Col5a2Q3U962 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col5a2Q3U962 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.99■□□□□ 0.31
Col5a2Q3U962 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col5a2Q3U962 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Col5a2Q3U962 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Rn7s1-201ENSMUST00000174924 300 ntBASIC16.98■□□□□ 0.31
Col5a2Q3U962 Rn7s2-201ENSMUST00000175032 300 ntBASIC16.98■□□□□ 0.31
Col5a2Q3U962 Gm26461-201ENSMUST00000175064 290 ntBASIC16.98■□□□□ 0.31
Col5a2Q3U962 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Gm9823-201ENSMUST00000051212 327 ntBASIC16.98■□□□□ 0.31
Col5a2Q3U962 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Gm17383-201ENSMUST00000078739 1041 ntBASIC16.98■□□□□ 0.31
Col5a2Q3U962 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col5a2Q3U962 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.97■□□□□ 0.31
Col5a2Q3U962 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Col5a2Q3U962 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.97■□□□□ 0.31
Col5a2Q3U962 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Col5a2Q3U962 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms