Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Gm43118-201ENSMUST00000199149 775 ntBASIC15.33■□□□□ 0.04
Col19a1Q0VF58 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.33■□□□□ 0.04
Col19a1Q0VF58 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.33■□□□□ 0.04
Col19a1Q0VF58 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col19a1Q0VF58 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Col19a1Q0VF58 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.33■□□□□ 0.04
Col19a1Q0VF58 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col19a1Q0VF58 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.33■□□□□ 0.04
Col19a1Q0VF58 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col19a1Q0VF58 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col19a1Q0VF58 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col19a1Q0VF58 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Col19a1Q0VF58 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Col19a1Q0VF58 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.33■□□□□ 0.04
Col19a1Q0VF58 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col19a1Q0VF58 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col19a1Q0VF58 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.33■□□□□ 0.04
Col19a1Q0VF58 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Col19a1Q0VF58 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col19a1Q0VF58 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Gm44364-201ENSMUST00000198368 141 ntBASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Gm6983-201ENSMUST00000214912 628 ntBASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Cts7-204ENSMUST00000225321 1257 ntBASIC15.32■□□□□ 0.04
Col19a1Q0VF58 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col19a1Q0VF58 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col19a1Q0VF58 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Gm26464-201ENSMUST00000157094 305 ntBASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col19a1Q0VF58 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Gm37008-201ENSMUST00000195712 319 ntBASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Gm8598-201ENSMUST00000221184 836 ntBASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col19a1Q0VF58 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms