Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tff1Q08423 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Tff1Q08423 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Tff1Q08423 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tff1Q08423 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.08□□□□□ -0.48
Tff1Q08423 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Tff1Q08423 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tff1Q08423 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Tff1Q08423 Gm15920-201ENSMUST00000118998 402 ntBASIC12.08□□□□□ -0.48
Tff1Q08423 Gm23547-201ENSMUST00000158210 271 ntBASIC12.08□□□□□ -0.48
Tff1Q08423 Gm9682-201ENSMUST00000197505 556 ntBASIC12.08□□□□□ -0.48
Tff1Q08423 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Tff1Q08423 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.08□□□□□ -0.48
Tff1Q08423 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.08□□□□□ -0.48
Tff1Q08423 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Tff1Q08423 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Tff1Q08423 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.08□□□□□ -0.48
Tff1Q08423 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tff1Q08423 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Tff1Q08423 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.07□□□□□ -0.48
Tff1Q08423 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Tff1Q08423 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.07□□□□□ -0.48
Tff1Q08423 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.07□□□□□ -0.48
Tff1Q08423 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.07□□□□□ -0.48
Tff1Q08423 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.07□□□□□ -0.48
Tff1Q08423 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tff1Q08423 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.07□□□□□ -0.48
Tff1Q08423 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.07□□□□□ -0.48
Tff1Q08423 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.07□□□□□ -0.48
Tff1Q08423 Gm10175-201ENSMUST00000086013 645 ntBASIC12.07□□□□□ -0.48
Tff1Q08423 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.07□□□□□ -0.48
Tff1Q08423 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Tff1Q08423 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.07□□□□□ -0.48
Tff1Q08423 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.07□□□□□ -0.48
Tff1Q08423 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.07□□□□□ -0.48
Tff1Q08423 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Tff1Q08423 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tff1Q08423 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tff1Q08423 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Tff1Q08423 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tff1Q08423 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Tff1Q08423 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Tff1Q08423 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Tff1Q08423 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms