Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox4Q06831 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox4Q06831 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox4Q06831 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox4Q06831 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox4Q06831 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox4Q06831 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox4Q06831 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox4Q06831 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox4Q06831 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.27□□□□□ -0.12
Sox4Q06831 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Sox4Q06831 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.27□□□□□ -0.12
Sox4Q06831 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Sox4Q06831 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Sox4Q06831 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox4Q06831 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sox4Q06831 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox4Q06831 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Sox4Q06831 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox4Q06831 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox4Q06831 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox4Q06831 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sox4Q06831 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.27□□□□□ -0.12
Sox4Q06831 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox4Q06831 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.27□□□□□ -0.13
Sox4Q06831 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox4Q06831 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.27□□□□□ -0.13
Sox4Q06831 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.27□□□□□ -0.13
Sox4Q06831 Gm22175-201ENSMUST00000175007 78 ntBASIC14.27□□□□□ -0.13
Sox4Q06831 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.27□□□□□ -0.13
Sox4Q06831 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox4Q06831 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox4Q06831 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.27□□□□□ -0.13
Sox4Q06831 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Sox4Q06831 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox4Q06831 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox4Q06831 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox4Q06831 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox4Q06831 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox4Q06831 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Sox4Q06831 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sox4Q06831 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox4Q06831 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox4Q06831 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox4Q06831 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.26□□□□□ -0.13
Sox4Q06831 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox4Q06831 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox4Q06831 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sox4Q06831 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox4Q06831 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox4Q06831 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.26□□□□□ -0.13
Sox4Q06831 Gm6415-201ENSMUST00000118488 348 ntBASIC14.26□□□□□ -0.13
Sox4Q06831 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox4Q06831 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox4Q06831 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.26□□□□□ -0.13
Sox4Q06831 Gm18766-201ENSMUST00000189811 808 ntBASIC14.26□□□□□ -0.13
Sox4Q06831 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sox4Q06831 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox4Q06831 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox4Q06831 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox4Q06831 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox4Q06831 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox4Q06831 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox4Q06831 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sox4Q06831 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sox4Q06831 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sox4Q06831 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sox4Q06831 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sox4Q06831 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.25□□□□□ -0.13
Sox4Q06831 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Sox4Q06831 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sox4Q06831 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Mir6956-201ENSMUST00000183598 62 ntBASIC14.25□□□□□ -0.13
Sox4Q06831 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.25□□□□□ -0.13
Sox4Q06831 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.25□□□□□ -0.13
Sox4Q06831 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.25□□□□□ -0.13
Sox4Q06831 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sox4Q06831 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.25□□□□□ -0.13
Sox4Q06831 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox4Q06831 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms