Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.19□□□□□ -0.14
Col9a1Q05722 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.19□□□□□ -0.14
Col9a1Q05722 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.19□□□□□ -0.14
Col9a1Q05722 AC173345.3-201ENSMUST00000221245 1093 ntBASIC14.19□□□□□ -0.14
Col9a1Q05722 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a1Q05722 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a1Q05722 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a1Q05722 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a1Q05722 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a1Q05722 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a1Q05722 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a1Q05722 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col9a1Q05722 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Col9a1Q05722 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a1Q05722 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a1Q05722 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.19□□□□□ -0.14
Col9a1Q05722 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col9a1Q05722 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.18□□□□□ -0.14
Col9a1Q05722 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.18□□□□□ -0.14
Col9a1Q05722 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col9a1Q05722 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Col9a1Q05722 Gm14017-201ENSMUST00000121934 386 ntBASIC14.18□□□□□ -0.14
Col9a1Q05722 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 Gm2991-201ENSMUST00000173338 480 ntBASIC14.18□□□□□ -0.14
Col9a1Q05722 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.18□□□□□ -0.14
Col9a1Q05722 Gm29396-201ENSMUST00000185659 716 ntBASIC14.18□□□□□ -0.14
Col9a1Q05722 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.18□□□□□ -0.14
Col9a1Q05722 Gm37017-201ENSMUST00000195266 747 ntBASIC14.18□□□□□ -0.14
Col9a1Q05722 Gm44545-201ENSMUST00000208262 746 ntBASIC14.18□□□□□ -0.14
Col9a1Q05722 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.18□□□□□ -0.14
Col9a1Q05722 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col9a1Q05722 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col9a1Q05722 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Col9a1Q05722 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.18□□□□□ -0.14
Col9a1Q05722 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC14.18□□□□□ -0.14
Col9a1Q05722 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.18□□□□□ -0.14
Col9a1Q05722 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a1Q05722 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a1Q05722 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a1Q05722 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a1Q05722 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a1Q05722 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a1Q05722 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.17□□□□□ -0.14
Col9a1Q05722 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a1Q05722 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col9a1Q05722 Gm8312-201ENSMUST00000119380 618 ntBASIC14.17□□□□□ -0.14
Col9a1Q05722 Gm11331-201ENSMUST00000119764 288 ntBASIC14.17□□□□□ -0.14
Col9a1Q05722 Gm12752-201ENSMUST00000121657 811 ntBASIC14.17□□□□□ -0.14
Col9a1Q05722 Gm8194-201ENSMUST00000159783 859 ntBASIC14.17□□□□□ -0.14
Col9a1Q05722 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.17□□□□□ -0.14
Col9a1Q05722 Gm17790-201ENSMUST00000191545 1228 ntBASIC14.17□□□□□ -0.14
Col9a1Q05722 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.17□□□□□ -0.14
Col9a1Q05722 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a1Q05722 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a1Q05722 Prl7a1-203ENSMUST00000224852 1283 ntBASIC14.17□□□□□ -0.14
Col9a1Q05722 CT025525.2-201ENSMUST00000227743 423 ntBASIC14.17□□□□□ -0.14
Col9a1Q05722 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a1Q05722 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a1Q05722 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col9a1Q05722 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a1Q05722 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a1Q05722 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a1Q05722 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a1Q05722 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a1Q05722 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.17□□□□□ -0.14
Col9a1Q05722 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a1Q05722 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a1Q05722 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a1Q05722 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a1Q05722 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.16□□□□□ -0.14
Col9a1Q05722 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Col9a1Q05722 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a1Q05722 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Col9a1Q05722 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a1Q05722 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.16□□□□□ -0.14
Col9a1Q05722 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a1Q05722 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Col9a1Q05722 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a1Q05722 Gm43316-201ENSMUST00000197252 1295 ntBASIC14.16□□□□□ -0.14
Col9a1Q05722 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.16□□□□□ -0.14
Col9a1Q05722 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a1Q05722 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a1Q05722 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms