Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.74□□□□□ -0.21
Nkx3-2P97503 Gm15483-201ENSMUST00000120338 456 ntBASIC13.74□□□□□ -0.21
Nkx3-2P97503 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Gm27920-201ENSMUST00000183953 96 ntBASIC13.74□□□□□ -0.21
Nkx3-2P97503 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.73□□□□□ -0.21
Nkx3-2P97503 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.73□□□□□ -0.21
Nkx3-2P97503 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.73□□□□□ -0.21
Nkx3-2P97503 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.73□□□□□ -0.21
Nkx3-2P97503 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx3-2P97503 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nkx3-2P97503 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.72□□□□□ -0.21
Nkx3-2P97503 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx3-2P97503 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx3-2P97503 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms