Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Npas1P97459 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Npas1P97459 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Npas1P97459 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Npas1P97459 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Npas1P97459 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Npas1P97459 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Npas1P97459 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Npas1P97459 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Npas1P97459 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.21□□□□□ -0.46
Npas1P97459 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Npas1P97459 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Npas1P97459 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Npas1P97459 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Npas1P97459 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.2□□□□□ -0.46
Npas1P97459 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Npas1P97459 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Npas1P97459 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Npas1P97459 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.2□□□□□ -0.46
Npas1P97459 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.2□□□□□ -0.46
Npas1P97459 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.2□□□□□ -0.46
Npas1P97459 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.2□□□□□ -0.46
Npas1P97459 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.2□□□□□ -0.46
Npas1P97459 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Npas1P97459 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.2□□□□□ -0.46
Npas1P97459 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Npas1P97459 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Npas1P97459 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Npas1P97459 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Npas1P97459 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Npas1P97459 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Npas1P97459 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Npas1P97459 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Npas1P97459 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.19□□□□□ -0.46
Npas1P97459 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.19□□□□□ -0.46
Npas1P97459 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Npas1P97459 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.19□□□□□ -0.46
Npas1P97459 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 Gm12008-201ENSMUST00000117791 755 ntBASIC12.19□□□□□ -0.46
Npas1P97459 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.19□□□□□ -0.46
Npas1P97459 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.19□□□□□ -0.46
Npas1P97459 Gm25745-201ENSMUST00000174945 133 ntBASIC12.19□□□□□ -0.46
Npas1P97459 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Npas1P97459 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.19□□□□□ -0.46
Npas1P97459 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Npas1P97459 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.19□□□□□ -0.46
Npas1P97459 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.19□□□□□ -0.46
Npas1P97459 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Npas1P97459 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Npas1P97459 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Npas1P97459 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npas1P97459 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Npas1P97459 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Npas1P97459 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Npas1P97459 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.18□□□□□ -0.46
Npas1P97459 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Celf4-206ENSMUST00000224553 1729 ntBASIC12.18□□□□□ -0.46
Npas1P97459 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms