Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Gm14277-201ENSMUST00000121195 360 ntBASIC9.68□□□□□ -0.86
PrkdcP97313 Gm37489-201ENSMUST00000191883 159 ntBASIC9.68□□□□□ -0.86
PrkdcP97313 Gm42929-201ENSMUST00000198374 1286 ntBASIC9.68□□□□□ -0.86
PrkdcP97313 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
PrkdcP97313 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
PrkdcP97313 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
PrkdcP97313 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
PrkdcP97313 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
PrkdcP97313 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Gm5884-201ENSMUST00000036712 1479 ntBASIC9.67□□□□□ -0.86
PrkdcP97313 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.67□□□□□ -0.86
PrkdcP97313 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC9.67□□□□□ -0.86
PrkdcP97313 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC9.67□□□□□ -0.86
PrkdcP97313 Gm29608-201ENSMUST00000190444 463 ntBASIC9.67□□□□□ -0.86
PrkdcP97313 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
PrkdcP97313 Gm8242-201ENSMUST00000193029 1420 ntBASIC9.67□□□□□ -0.86
PrkdcP97313 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Gm43072-201ENSMUST00000200283 1671 ntBASIC9.67□□□□□ -0.86
PrkdcP97313 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Gm11964-201ENSMUST00000120982 444 ntBASIC9.67□□□□□ -0.86
PrkdcP97313 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
PrkdcP97313 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
PrkdcP97313 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
PrkdcP97313 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
PrkdcP97313 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Gm13385-201ENSMUST00000121089 220 ntBASIC9.67□□□□□ -0.86
PrkdcP97313 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC9.67□□□□□ -0.86
PrkdcP97313 Gm27320-201ENSMUST00000184892 109 ntBASIC9.67□□□□□ -0.86
PrkdcP97313 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC9.67□□□□□ -0.86
PrkdcP97313 Gm10608-202ENSMUST00000213924 676 ntBASIC9.67□□□□□ -0.86
PrkdcP97313 Itm2b-204ENSMUST00000228637 783 ntBASIC9.67□□□□□ -0.86
PrkdcP97313 Mxra8os-201ENSMUST00000097740 687 ntBASIC9.67□□□□□ -0.86
PrkdcP97313 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PrkdcP97313 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Gm15370-201ENSMUST00000117158 253 ntBASIC9.66□□□□□ -0.86
PrkdcP97313 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC9.66□□□□□ -0.86
PrkdcP97313 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
PrkdcP97313 Gm24420-201ENSMUST00000176676 59 ntBASIC9.66□□□□□ -0.86
PrkdcP97313 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC9.66□□□□□ -0.86
PrkdcP97313 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
PrkdcP97313 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 AC168058.1-201ENSMUST00000219521 2282 ntBASIC9.66□□□□□ -0.86
PrkdcP97313 Hivep3-201ENSMUST00000084306 2973 ntBASIC9.66□□□□□ -0.86
PrkdcP97313 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC9.66□□□□□ -0.86
PrkdcP97313 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC9.66□□□□□ -0.86
PrkdcP97313 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
PrkdcP97313 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC9.66□□□□□ -0.86
PrkdcP97313 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC9.66□□□□□ -0.86
PrkdcP97313 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC9.66□□□□□ -0.86
PrkdcP97313 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC9.66□□□□□ -0.86
PrkdcP97313 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC9.66□□□□□ -0.86
PrkdcP97313 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms