Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.18□□□□□ -0.46
SgcaP82350 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SgcaP82350 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.18□□□□□ -0.46
SgcaP82350 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Gm6345-202ENSMUST00000180900 204 ntBASIC12.18□□□□□ -0.46
SgcaP82350 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.18□□□□□ -0.46
SgcaP82350 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SgcaP82350 Gm5587-201ENSMUST00000206270 674 ntBASIC12.18□□□□□ -0.46
SgcaP82350 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SgcaP82350 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SgcaP82350 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SgcaP82350 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SgcaP82350 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SgcaP82350 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SgcaP82350 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.17□□□□□ -0.46
SgcaP82350 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.17□□□□□ -0.46
SgcaP82350 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.17□□□□□ -0.46
SgcaP82350 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SgcaP82350 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Gm25745-201ENSMUST00000174945 133 ntBASIC12.17□□□□□ -0.46
SgcaP82350 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.17□□□□□ -0.46
SgcaP82350 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.17□□□□□ -0.46
SgcaP82350 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.17□□□□□ -0.46
SgcaP82350 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
SgcaP82350 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SgcaP82350 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SgcaP82350 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SgcaP82350 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcaP82350 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.16□□□□□ -0.46
SgcaP82350 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.16□□□□□ -0.46
SgcaP82350 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SgcaP82350 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SgcaP82350 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SgcaP82350 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SgcaP82350 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SgcaP82350 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SgcaP82350 Gm15794-201ENSMUST00000120182 631 ntBASIC12.16□□□□□ -0.46
SgcaP82350 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.16□□□□□ -0.46
SgcaP82350 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.16□□□□□ -0.46
SgcaP82350 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SgcaP82350 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.16□□□□□ -0.46
SgcaP82350 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SgcaP82350 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.16□□□□□ -0.46
SgcaP82350 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
SgcaP82350 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.16□□□□□ -0.46
SgcaP82350 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcaP82350 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms