Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CiitaP79621 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CiitaP79621 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CiitaP79621 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CiitaP79621 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.72■□□□□ 0.11
CiitaP79621 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CiitaP79621 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CiitaP79621 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.72■□□□□ 0.11
CiitaP79621 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CiitaP79621 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CiitaP79621 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CiitaP79621 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CiitaP79621 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.71■□□□□ 0.11
CiitaP79621 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.71■□□□□ 0.11
CiitaP79621 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CiitaP79621 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CiitaP79621 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CiitaP79621 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CiitaP79621 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CiitaP79621 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CiitaP79621 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CiitaP79621 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CiitaP79621 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CiitaP79621 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CiitaP79621 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CiitaP79621 AA619741-201ENSMUST00000195095 646 ntBASIC15.71■□□□□ 0.11
CiitaP79621 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CiitaP79621 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.71■□□□□ 0.11
CiitaP79621 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CiitaP79621 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CiitaP79621 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CiitaP79621 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.71■□□□□ 0.11
CiitaP79621 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CiitaP79621 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CiitaP79621 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CiitaP79621 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CiitaP79621 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
CiitaP79621 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CiitaP79621 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.7■□□□□ 0.1
CiitaP79621 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
CiitaP79621 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CiitaP79621 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CiitaP79621 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.7■□□□□ 0.1
CiitaP79621 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Gm43703-201ENSMUST00000200523 763 ntBASIC15.7■□□□□ 0.1
CiitaP79621 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.7■□□□□ 0.1
CiitaP79621 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CiitaP79621 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.7■□□□□ 0.1
CiitaP79621 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CiitaP79621 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.7■□□□□ 0.1
CiitaP79621 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CiitaP79621 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CiitaP79621 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CiitaP79621 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CiitaP79621 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CiitaP79621 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CiitaP79621 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CiitaP79621 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.69■□□□□ 0.1
CiitaP79621 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.69■□□□□ 0.1
CiitaP79621 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.69■□□□□ 0.1
CiitaP79621 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.69■□□□□ 0.1
CiitaP79621 Gm15487-201ENSMUST00000122373 465 ntBASIC15.69■□□□□ 0.1
CiitaP79621 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CiitaP79621 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CiitaP79621 Gm46209-201ENSMUST00000217912 553 ntBASIC15.69■□□□□ 0.1
CiitaP79621 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CiitaP79621 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CiitaP79621 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CiitaP79621 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CiitaP79621 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CiitaP79621 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CiitaP79621 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CiitaP79621 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CiitaP79621 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CiitaP79621 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.68■□□□□ 0.1
CiitaP79621 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms