Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm25745-201ENSMUST00000174945 133 ntBASIC14.38□□□□□ -0.11
Crnkl1P63154 Gm34391-201ENSMUST00000203706 907 ntBASIC14.38□□□□□ -0.11
Crnkl1P63154 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Crnkl1P63154 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.38□□□□□ -0.11
Crnkl1P63154 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.38□□□□□ -0.11
Crnkl1P63154 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.38□□□□□ -0.11
Crnkl1P63154 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Crnkl1P63154 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.37□□□□□ -0.11
Crnkl1P63154 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.37□□□□□ -0.11
Crnkl1P63154 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.37□□□□□ -0.11
Crnkl1P63154 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Crnkl1P63154 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.37□□□□□ -0.11
Crnkl1P63154 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.37□□□□□ -0.11
Crnkl1P63154 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.37□□□□□ -0.11
Crnkl1P63154 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.37□□□□□ -0.11
Crnkl1P63154 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Crnkl1P63154 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Crnkl1P63154 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Crnkl1P63154 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crnkl1P63154 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crnkl1P63154 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crnkl1P63154 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Crnkl1P63154 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.36□□□□□ -0.11
Crnkl1P63154 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crnkl1P63154 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Crnkl1P63154 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.36□□□□□ -0.11
Crnkl1P63154 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crnkl1P63154 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crnkl1P63154 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crnkl1P63154 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crnkl1P63154 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crnkl1P63154 Gm27459-201ENSMUST00000184860 107 ntBASIC14.36□□□□□ -0.11
Crnkl1P63154 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.36□□□□□ -0.11
Crnkl1P63154 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.36□□□□□ -0.11
Crnkl1P63154 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crnkl1P63154 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Crnkl1P63154 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Crnkl1P63154 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crnkl1P63154 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crnkl1P63154 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crnkl1P63154 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crnkl1P63154 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Crnkl1P63154 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Crnkl1P63154 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crnkl1P63154 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crnkl1P63154 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Crnkl1P63154 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Crnkl1P63154 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.35□□□□□ -0.11
Crnkl1P63154 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.35□□□□□ -0.11
Crnkl1P63154 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.35□□□□□ -0.11
Crnkl1P63154 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.35□□□□□ -0.11
Crnkl1P63154 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Crnkl1P63154 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms