Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gabra1P62812 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Gabra1P62812 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gabra1P62812 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gabra1P62812 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Gabra1P62812 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Gabra1P62812 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Gabra1P62812 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.23□□□□□ -0.45
Gabra1P62812 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Gabra1P62812 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gabra1P62812 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Gabra1P62812 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Gabra1P62812 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.23□□□□□ -0.45
Gabra1P62812 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gabra1P62812 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Gabra1P62812 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.22□□□□□ -0.45
Gabra1P62812 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.22□□□□□ -0.45
Gabra1P62812 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Gabra1P62812 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.22□□□□□ -0.45
Gabra1P62812 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Gabra1P62812 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.22□□□□□ -0.45
Gabra1P62812 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Gabra1P62812 Gm15794-201ENSMUST00000120182 631 ntBASIC12.22□□□□□ -0.45
Gabra1P62812 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.22□□□□□ -0.45
Gabra1P62812 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Gabra1P62812 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.22□□□□□ -0.45
Gabra1P62812 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Gabra1P62812 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Gabra1P62812 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.22□□□□□ -0.45
Gabra1P62812 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gabra1P62812 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gabra1P62812 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gabra1P62812 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gabra1P62812 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.21□□□□□ -0.45
Gabra1P62812 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gabra1P62812 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.21□□□□□ -0.45
Gabra1P62812 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gabra1P62812 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gabra1P62812 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Gabra1P62812 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gabra1P62812 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gabra1P62812 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Gabra1P62812 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gabra1P62812 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.21□□□□□ -0.45
Gabra1P62812 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Gabra1P62812 Gm11950-201ENSMUST00000121615 838 ntBASIC12.21□□□□□ -0.45
Gabra1P62812 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.21□□□□□ -0.45
Gabra1P62812 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gabra1P62812 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.21□□□□□ -0.45
Gabra1P62812 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.21□□□□□ -0.45
Gabra1P62812 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Gabra1P62812 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.21□□□□□ -0.45
Gabra1P62812 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Gabra1P62812 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms