Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lsm5P62322 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.1□□□□□ -0.47
Lsm5P62322 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.1□□□□□ -0.47
Lsm5P62322 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lsm5P62322 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lsm5P62322 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Lsm5P62322 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Gm10499-201ENSMUST00000174094 934 ntBASIC12.1□□□□□ -0.47
Lsm5P62322 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.1□□□□□ -0.47
Lsm5P62322 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.1□□□□□ -0.47
Lsm5P62322 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lsm5P62322 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lsm5P62322 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.1□□□□□ -0.47
Lsm5P62322 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lsm5P62322 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lsm5P62322 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.09□□□□□ -0.47
Lsm5P62322 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.09□□□□□ -0.47
Lsm5P62322 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.09□□□□□ -0.47
Lsm5P62322 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lsm5P62322 Gm43799-201ENSMUST00000201845 579 ntBASIC12.09□□□□□ -0.47
Lsm5P62322 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Lsm5P62322 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Lsm5P62322 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.09□□□□□ -0.47
Lsm5P62322 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm5P62322 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.09□□□□□ -0.47
Lsm5P62322 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
Lsm5P62322 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lsm5P62322 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lsm5P62322 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lsm5P62322 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Lsm5P62322 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.08□□□□□ -0.48
Lsm5P62322 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Gm9013-201ENSMUST00000132939 882 ntBASIC12.08□□□□□ -0.48
Lsm5P62322 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.08□□□□□ -0.48
Lsm5P62322 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Lsm5P62322 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.08□□□□□ -0.48
Lsm5P62322 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm5P62322 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms