Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Sf3b6P59708 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.87□□□□□ -0.35
Sf3b6P59708 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.87□□□□□ -0.35
Sf3b6P59708 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sf3b6P59708 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.87□□□□□ -0.35
Sf3b6P59708 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.87□□□□□ -0.35
Sf3b6P59708 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.87□□□□□ -0.35
Sf3b6P59708 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sf3b6P59708 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sf3b6P59708 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Sf3b6P59708 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
Sf3b6P59708 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.87□□□□□ -0.35
Sf3b6P59708 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sf3b6P59708 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.87□□□□□ -0.35
Sf3b6P59708 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.86□□□□□ -0.35
Sf3b6P59708 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.86□□□□□ -0.35
Sf3b6P59708 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Gm11452-201ENSMUST00000122376 690 ntBASIC12.86□□□□□ -0.35
Sf3b6P59708 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.86□□□□□ -0.35
Sf3b6P59708 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Gm7461-201ENSMUST00000058918 827 ntBASIC12.86□□□□□ -0.35
Sf3b6P59708 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Sf3b6P59708 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.86□□□□□ -0.35
Sf3b6P59708 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.86□□□□□ -0.35
Sf3b6P59708 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sf3b6P59708 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sf3b6P59708 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sf3b6P59708 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3b6P59708 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sf3b6P59708 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sf3b6P59708 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Sf3b6P59708 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sf3b6P59708 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Gm13884-201ENSMUST00000118103 829 ntBASIC12.85□□□□□ -0.35
Sf3b6P59708 Gm13464-201ENSMUST00000119418 935 ntBASIC12.85□□□□□ -0.35
Sf3b6P59708 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.85□□□□□ -0.35
Sf3b6P59708 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms