Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC19.48■□□□□ 0.71
Nphp4P59240 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC19.48■□□□□ 0.71
Nphp4P59240 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Nphp4P59240 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nphp4P59240 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC19.48■□□□□ 0.71
Nphp4P59240 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC19.48■□□□□ 0.71
Nphp4P59240 CT030657.3-201ENSMUST00000222707 1200 ntBASIC19.48■□□□□ 0.71
Nphp4P59240 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nphp4P59240 Mir497b-201ENSMUST00000093601 125 ntBASIC19.48■□□□□ 0.71
Nphp4P59240 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nphp4P59240 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nphp4P59240 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nphp4P59240 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nphp4P59240 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nphp4P59240 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nphp4P59240 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nphp4P59240 Gm44981-201ENSMUST00000205549 1943 ntBASIC19.47■□□□□ 0.71
Nphp4P59240 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nphp4P59240 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nphp4P59240 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nphp4P59240 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Nphp4P59240 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nphp4P59240 Gm18905-201ENSMUST00000205454 928 ntBASIC19.47■□□□□ 0.71
Nphp4P59240 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC19.47■□□□□ 0.71
Nphp4P59240 AC155252.1-201ENSMUST00000226462 1208 ntBASIC19.47■□□□□ 0.71
Nphp4P59240 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nphp4P59240 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nphp4P59240 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nphp4P59240 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nphp4P59240 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
Nphp4P59240 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nphp4P59240 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nphp4P59240 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Nphp4P59240 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp4P59240 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp4P59240 AC114543.1-201ENSMUST00000226451 1558 ntBASIC19.46■□□□□ 0.71
Nphp4P59240 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp4P59240 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp4P59240 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC19.46■□□□□ 0.71
Nphp4P59240 AC132467.2-202ENSMUST00000227726 559 ntBASIC19.46■□□□□ 0.71
Nphp4P59240 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp4P59240 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nphp4P59240 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp4P59240 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp4P59240 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp4P59240 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp4P59240 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nphp4P59240 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp4P59240 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp4P59240 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp4P59240 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp4P59240 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp4P59240 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp4P59240 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC19.45■□□□□ 0.7
Nphp4P59240 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp4P59240 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Nphp4P59240 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp4P59240 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nphp4P59240 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.45■□□□□ 0.7
Nphp4P59240 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp4P59240 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC19.45■□□□□ 0.7
Nphp4P59240 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp4P59240 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nphp4P59240 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp4P59240 Ighv1-51-201ENSMUST00000192903 354 ntBASIC19.45■□□□□ 0.7
Nphp4P59240 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp4P59240 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC19.45■□□□□ 0.7
Nphp4P59240 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.45■□□□□ 0.7
Nphp4P59240 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp4P59240 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp4P59240 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp4P59240 AC168058.1-201ENSMUST00000219521 2282 ntBASIC19.45■□□□□ 0.7
Nphp4P59240 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC19.45■□□□□ 0.7
Nphp4P59240 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC19.45■□□□□ 0.7
Nphp4P59240 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp4P59240 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp4P59240 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp4P59240 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp4P59240 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp4P59240 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Nphp4P59240 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC19.44■□□□□ 0.7
Nphp4P59240 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.44■□□□□ 0.7
Nphp4P59240 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp4P59240 Gm9768-201ENSMUST00000206007 2861 ntBASIC19.44■□□□□ 0.7
Nphp4P59240 Gm11918-201ENSMUST00000121660 179 ntBASIC19.44■□□□□ 0.7
Nphp4P59240 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC19.44■□□□□ 0.7
Nphp4P59240 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC19.44■□□□□ 0.7
Nphp4P59240 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp4P59240 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp4P59240 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nphp4P59240 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp4P59240 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC19.44■□□□□ 0.7
Nphp4P59240 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp4P59240 Gm42471-201ENSMUST00000201457 1865 ntBASIC19.44■□□□□ 0.7
Nphp4P59240 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp4P59240 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp4P59240 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp4P59240 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp4P59240 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp4P59240 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms