Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm18489-201ENSMUST00000172565 551 ntBASIC16.21■□□□□ 0.19
Tpm1P58771 Gm27357-201ENSMUST00000183754 135 ntBASIC16.21■□□□□ 0.19
Tpm1P58771 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.21■□□□□ 0.19
Tpm1P58771 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.21■□□□□ 0.19
Tpm1P58771 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.21■□□□□ 0.19
Tpm1P58771 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tpm1P58771 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tpm1P58771 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tpm1P58771 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Tpm1P58771 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tpm1P58771 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tpm1P58771 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Tpm1P58771 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tpm1P58771 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tpm1P58771 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tpm1P58771 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tpm1P58771 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Tpm1P58771 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tpm1P58771 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tpm1P58771 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Tpm1P58771 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.21■□□□□ 0.18
Tpm1P58771 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tpm1P58771 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Tpm1P58771 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tpm1P58771 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
Tpm1P58771 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Tpm1P58771 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tpm1P58771 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tpm1P58771 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tpm1P58771 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tpm1P58771 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tpm1P58771 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tpm1P58771 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tpm1P58771 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.2■□□□□ 0.18
Tpm1P58771 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tpm1P58771 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Tpm1P58771 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tpm1P58771 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.2■□□□□ 0.18
Tpm1P58771 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tpm1P58771 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.2■□□□□ 0.18
Tpm1P58771 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Tpm1P58771 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.2■□□□□ 0.18
Tpm1P58771 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tpm1P58771 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Tpm1P58771 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tpm1P58771 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tpm1P58771 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tpm1P58771 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tpm1P58771 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tpm1P58771 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tpm1P58771 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Tpm1P58771 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tpm1P58771 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC16.19■□□□□ 0.18
Tpm1P58771 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Tpm1P58771 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.19■□□□□ 0.18
Tpm1P58771 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Tpm1P58771 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.19■□□□□ 0.18
Tpm1P58771 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.19■□□□□ 0.18
Tpm1P58771 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.19■□□□□ 0.18
Tpm1P58771 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Tpm1P58771 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tpm1P58771 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tpm1P58771 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tpm1P58771 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tpm1P58771 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tpm1P58771 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tpm1P58771 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tpm1P58771 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tpm1P58771 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tpm1P58771 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tpm1P58771 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Tpm1P58771 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Tpm1P58771 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
Tpm1P58771 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Tpm1P58771 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.18■□□□□ 0.18
Tpm1P58771 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tpm1P58771 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tpm1P58771 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms