Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13□□□□□ -0.33
Abcd3P55096 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13□□□□□ -0.33
Abcd3P55096 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Gm37912-201ENSMUST00000191895 3076 ntBASIC13□□□□□ -0.33
Abcd3P55096 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13□□□□□ -0.33
Abcd3P55096 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Abcd3P55096 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abcd3P55096 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.99□□□□□ -0.33
Abcd3P55096 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Abcd3P55096 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.99□□□□□ -0.33
Abcd3P55096 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Abcd3P55096 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.99□□□□□ -0.33
Abcd3P55096 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Abcd3P55096 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Abcd3P55096 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Abcd3P55096 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.99□□□□□ -0.33
Abcd3P55096 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.99□□□□□ -0.33
Abcd3P55096 Gm5479-201ENSMUST00000160578 435 ntBASIC12.99□□□□□ -0.33
Abcd3P55096 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.99□□□□□ -0.33
Abcd3P55096 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.99□□□□□ -0.33
Abcd3P55096 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
Abcd3P55096 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Abcd3P55096 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Abcd3P55096 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abcd3P55096 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.99□□□□□ -0.33
Abcd3P55096 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.98□□□□□ -0.33
Abcd3P55096 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Abcd3P55096 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Abcd3P55096 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Abcd3P55096 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.98□□□□□ -0.33
Abcd3P55096 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.98□□□□□ -0.33
Abcd3P55096 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Abcd3P55096 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.98□□□□□ -0.33
Abcd3P55096 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.98□□□□□ -0.33
Abcd3P55096 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.98□□□□□ -0.33
Abcd3P55096 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Abcd3P55096 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Abcd3P55096 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abcd3P55096 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Abcd3P55096 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.97□□□□□ -0.33
Abcd3P55096 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Abcd3P55096 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abcd3P55096 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms