Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC18.29■□□□□ 0.52
Msh6P54276 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC18.29■□□□□ 0.52
Msh6P54276 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Msh6P54276 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC18.29■□□□□ 0.52
Msh6P54276 AC102291.3-201ENSMUST00000226566 405 ntBASIC18.29■□□□□ 0.52
Msh6P54276 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh6P54276 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Msh6P54276 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Msh6P54276 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Msh6P54276 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Msh6P54276 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Msh6P54276 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Msh6P54276 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC18.28■□□□□ 0.52
Msh6P54276 AY702102-202ENSMUST00000194651 1173 ntBASIC18.28■□□□□ 0.52
Msh6P54276 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC18.28■□□□□ 0.52
Msh6P54276 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msh6P54276 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Msh6P54276 Gm11960-202ENSMUST00000181063 2858 ntBASIC18.27■□□□□ 0.52
Msh6P54276 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Msh6P54276 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC18.27■□□□□ 0.52
Msh6P54276 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Msh6P54276 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msh6P54276 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Msh6P54276 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Msh6P54276 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msh6P54276 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC18.27■□□□□ 0.52
Msh6P54276 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Msh6P54276 Gm12585-201ENSMUST00000117307 290 ntBASIC18.27■□□□□ 0.51
Msh6P54276 Gm27701-201ENSMUST00000184498 110 ntBASIC18.27■□□□□ 0.51
Msh6P54276 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Msh6P54276 Gm6916-202ENSMUST00000205523 195 ntBASIC18.27■□□□□ 0.51
Msh6P54276 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Msh6P54276 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Msh6P54276 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Msh6P54276 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC18.26■□□□□ 0.51
Msh6P54276 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Msh6P54276 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Msh6P54276 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Msh6P54276 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Msh6P54276 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Msh6P54276 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh6P54276 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
Msh6P54276 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh6P54276 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC18.25■□□□□ 0.51
Msh6P54276 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Msh6P54276 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC18.25■□□□□ 0.51
Msh6P54276 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh6P54276 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh6P54276 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Msh6P54276 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh6P54276 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Msh6P54276 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.25■□□□□ 0.51
Msh6P54276 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Msh6P54276 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Msh6P54276 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh6P54276 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh6P54276 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh6P54276 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh6P54276 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Msh6P54276 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Msh6P54276 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh6P54276 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms