Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.51□□□□□ -0.09
Fdft1P53798 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Fdft1P53798 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fdft1P53798 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Fdft1P53798 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fdft1P53798 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Fdft1P53798 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fdft1P53798 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Fdft1P53798 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
Fdft1P53798 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Fdft1P53798 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.5□□□□□ -0.09
Fdft1P53798 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
Fdft1P53798 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.5□□□□□ -0.09
Fdft1P53798 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.5□□□□□ -0.09
Fdft1P53798 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.5□□□□□ -0.09
Fdft1P53798 Gm23547-201ENSMUST00000158210 271 ntBASIC14.5□□□□□ -0.09
Fdft1P53798 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Fdft1P53798 Gm5177-201ENSMUST00000183092 997 ntBASIC14.5□□□□□ -0.09
Fdft1P53798 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.5□□□□□ -0.09
Fdft1P53798 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Fdft1P53798 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.5□□□□□ -0.09
Fdft1P53798 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.5□□□□□ -0.09
Fdft1P53798 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.5□□□□□ -0.09
Fdft1P53798 Gm10154-201ENSMUST00000084445 354 ntBASIC14.5□□□□□ -0.09
Fdft1P53798 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.5□□□□□ -0.09
Fdft1P53798 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Fdft1P53798 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.5□□□□□ -0.09
Fdft1P53798 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Fdft1P53798 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fdft1P53798 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fdft1P53798 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fdft1P53798 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Fdft1P53798 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fdft1P53798 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fdft1P53798 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fdft1P53798 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Fdft1P53798 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fdft1P53798 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fdft1P53798 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Fdft1P53798 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Fdft1P53798 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fdft1P53798 Gm16198-201ENSMUST00000118766 670 ntBASIC14.49□□□□□ -0.09
Fdft1P53798 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Fdft1P53798 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Fdft1P53798 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Fdft1P53798 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.49□□□□□ -0.09
Fdft1P53798 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.49□□□□□ -0.09
Fdft1P53798 Thap2-203ENSMUST00000218989 527 ntBASIC14.49□□□□□ -0.09
Fdft1P53798 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.49□□□□□ -0.09
Fdft1P53798 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fdft1P53798 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.49□□□□□ -0.09
Fdft1P53798 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.49□□□□□ -0.09
Fdft1P53798 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.49□□□□□ -0.09
Fdft1P53798 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fdft1P53798 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fdft1P53798 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Fdft1P53798 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.48□□□□□ -0.09
Fdft1P53798 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Fdft1P53798 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Fdft1P53798 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.48□□□□□ -0.09
Fdft1P53798 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.48□□□□□ -0.09
Fdft1P53798 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Fdft1P53798 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.48□□□□□ -0.09
Fdft1P53798 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.48□□□□□ -0.09
Fdft1P53798 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms