Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdx1P52946 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdx1P52946 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdx1P52946 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdx1P52946 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdx1P52946 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdx1P52946 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pdx1P52946 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdx1P52946 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Pdx1P52946 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Pdx1P52946 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.35□□□□□ -0.11
Pdx1P52946 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.35□□□□□ -0.11
Pdx1P52946 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.35□□□□□ -0.11
Pdx1P52946 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.35□□□□□ -0.11
Pdx1P52946 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.35□□□□□ -0.11
Pdx1P52946 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pdx1P52946 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pdx1P52946 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.35□□□□□ -0.11
Pdx1P52946 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Pdx1P52946 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdx1P52946 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.34□□□□□ -0.11
Pdx1P52946 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pdx1P52946 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pdx1P52946 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.34□□□□□ -0.11
Pdx1P52946 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.34□□□□□ -0.11
Pdx1P52946 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Pdx1P52946 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Gm38225-201ENSMUST00000194001 393 ntBASIC14.34□□□□□ -0.11
Pdx1P52946 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.34□□□□□ -0.11
Pdx1P52946 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Pdx1P52946 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.34□□□□□ -0.11
Pdx1P52946 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Pdx1P52946 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pdx1P52946 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.34□□□□□ -0.11
Pdx1P52946 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Pdx1P52946 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdx1P52946 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Pdx1P52946 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.33□□□□□ -0.11
Pdx1P52946 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pdx1P52946 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
Pdx1P52946 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pdx1P52946 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.33□□□□□ -0.11
Pdx1P52946 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdx1P52946 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Pdx1P52946 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pdx1P52946 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdx1P52946 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdx1P52946 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdx1P52946 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.33□□□□□ -0.12
Pdx1P52946 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pdx1P52946 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Pdx1P52946 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.33□□□□□ -0.12
Pdx1P52946 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.33□□□□□ -0.12
Pdx1P52946 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pdx1P52946 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms