Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hmga2P52927 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Hmga2P52927 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Hmga2P52927 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.34□□□□□ -0.43
Hmga2P52927 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Hmga2P52927 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Hmga2P52927 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Hmga2P52927 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hmga2P52927 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.34□□□□□ -0.43
Hmga2P52927 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.34□□□□□ -0.43
Hmga2P52927 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hmga2P52927 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Hmga2P52927 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmga2P52927 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Hmga2P52927 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hmga2P52927 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.33□□□□□ -0.43
Hmga2P52927 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmga2P52927 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmga2P52927 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.33□□□□□ -0.44
Hmga2P52927 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.33□□□□□ -0.44
Hmga2P52927 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmga2P52927 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmga2P52927 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmga2P52927 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmga2P52927 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Hmga2P52927 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmga2P52927 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmga2P52927 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.33□□□□□ -0.44
Hmga2P52927 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmga2P52927 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Hmga2P52927 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.33□□□□□ -0.44
Hmga2P52927 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.33□□□□□ -0.44
Hmga2P52927 Gm7787-201ENSMUST00000216858 688 ntBASIC12.33□□□□□ -0.44
Hmga2P52927 Gm18246-201ENSMUST00000221023 728 ntBASIC12.33□□□□□ -0.44
Hmga2P52927 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmga2P52927 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmga2P52927 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmga2P52927 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmga2P52927 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmga2P52927 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.33□□□□□ -0.44
Hmga2P52927 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Hmga2P52927 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmga2P52927 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.33□□□□□ -0.44
Hmga2P52927 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.33□□□□□ -0.44
Hmga2P52927 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Hmga2P52927 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmga2P52927 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmga2P52927 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmga2P52927 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.32□□□□□ -0.44
Hmga2P52927 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmga2P52927 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmga2P52927 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmga2P52927 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.32□□□□□ -0.44
Hmga2P52927 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmga2P52927 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.32□□□□□ -0.44
Hmga2P52927 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hmga2P52927 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.32□□□□□ -0.44
Hmga2P52927 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmga2P52927 Gm13418-201ENSMUST00000119097 944 ntBASIC12.32□□□□□ -0.44
Hmga2P52927 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Hmga2P52927 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmga2P52927 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Hmga2P52927 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.32□□□□□ -0.44
Hmga2P52927 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms