Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.69□□□□□ -0.06
Lhx3P50481 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Lhx3P50481 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx3P50481 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.69□□□□□ -0.06
Lhx3P50481 BC001981-202ENSMUST00000191393 1545 ntBASIC14.69□□□□□ -0.06
Lhx3P50481 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx3P50481 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Lhx3P50481 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Lhx3P50481 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.69□□□□□ -0.06
Lhx3P50481 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx3P50481 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx3P50481 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx3P50481 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx3P50481 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx3P50481 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx3P50481 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx3P50481 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx3P50481 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx3P50481 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx3P50481 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx3P50481 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx3P50481 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx3P50481 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx3P50481 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx3P50481 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx3P50481 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx3P50481 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx3P50481 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx3P50481 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Lhx3P50481 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx3P50481 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Lhx3P50481 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx3P50481 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.68□□□□□ -0.06
Lhx3P50481 Auts2-212ENSMUST00000178555 309 ntBASIC14.68□□□□□ -0.06
Lhx3P50481 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.68□□□□□ -0.06
Lhx3P50481 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.68□□□□□ -0.06
Lhx3P50481 Shd-206ENSMUST00000225145 998 ntBASIC14.68□□□□□ -0.06
Lhx3P50481 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.68□□□□□ -0.06
Lhx3P50481 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx3P50481 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx3P50481 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx3P50481 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx3P50481 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx3P50481 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx3P50481 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx3P50481 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Lhx3P50481 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx3P50481 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.68□□□□□ -0.06
Lhx3P50481 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx3P50481 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.68□□□□□ -0.06
Lhx3P50481 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Lhx3P50481 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx3P50481 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx3P50481 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx3P50481 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Lhx3P50481 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx3P50481 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Lhx3P50481 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx3P50481 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx3P50481 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx3P50481 Gm12882-201ENSMUST00000121696 517 ntBASIC14.67□□□□□ -0.06
Lhx3P50481 Gm12134-201ENSMUST00000122109 520 ntBASIC14.67□□□□□ -0.06
Lhx3P50481 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Lhx3P50481 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.67□□□□□ -0.06
Lhx3P50481 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx3P50481 AA619741-201ENSMUST00000195095 646 ntBASIC14.67□□□□□ -0.06
Lhx3P50481 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx3P50481 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Lhx3P50481 Mir125a-201ENSMUST00000083545 68 ntBASIC14.67□□□□□ -0.06
Lhx3P50481 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx3P50481 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx3P50481 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.67□□□□□ -0.06
Lhx3P50481 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx3P50481 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx3P50481 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx3P50481 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx3P50481 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx3P50481 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx3P50481 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx3P50481 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Lhx3P50481 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx3P50481 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.66□□□□□ -0.06
Lhx3P50481 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx3P50481 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx3P50481 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx3P50481 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx3P50481 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Lhx3P50481 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx3P50481 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.66□□□□□ -0.06
Lhx3P50481 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Lhx3P50481 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Lhx3P50481 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx3P50481 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx3P50481 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx3P50481 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx3P50481 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx3P50481 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Lhx3P50481 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx3P50481 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx3P50481 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms