Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.74□□□□□ -0.37
GdnfP48540 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.73□□□□□ -0.37
GdnfP48540 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
GdnfP48540 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
GdnfP48540 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
GdnfP48540 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
GdnfP48540 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
GdnfP48540 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.73□□□□□ -0.37
GdnfP48540 AC073947.1-201ENSMUST00000216991 649 ntBASIC12.73□□□□□ -0.37
GdnfP48540 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.73□□□□□ -0.37
GdnfP48540 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.73□□□□□ -0.37
GdnfP48540 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.73□□□□□ -0.37
GdnfP48540 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
GdnfP48540 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GdnfP48540 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.72□□□□□ -0.37
GdnfP48540 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
GdnfP48540 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.72□□□□□ -0.37
GdnfP48540 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Gm7222-201ENSMUST00000117512 906 ntBASIC12.72□□□□□ -0.37
GdnfP48540 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Gm8318-201ENSMUST00000182954 872 ntBASIC12.72□□□□□ -0.37
GdnfP48540 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.72□□□□□ -0.37
GdnfP48540 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
GdnfP48540 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
GdnfP48540 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
GdnfP48540 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.72□□□□□ -0.37
GdnfP48540 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.72□□□□□ -0.37
GdnfP48540 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GdnfP48540 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.72□□□□□ -0.37
GdnfP48540 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GdnfP48540 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GdnfP48540 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GdnfP48540 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GdnfP48540 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
GdnfP48540 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GdnfP48540 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GdnfP48540 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
GdnfP48540 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GdnfP48540 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GdnfP48540 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.71□□□□□ -0.37
GdnfP48540 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.71□□□□□ -0.37
GdnfP48540 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.71□□□□□ -0.37
GdnfP48540 Mzt1-203ENSMUST00000227948 952 ntBASIC12.71□□□□□ -0.37
GdnfP48540 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms