Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox2P48432 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Sox2P48432 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox2P48432 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox2P48432 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox2P48432 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox2P48432 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox2P48432 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Sox2P48432 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox2P48432 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox2P48432 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox2P48432 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox2P48432 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.61□□□□□ -0.23
Sox2P48432 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.61□□□□□ -0.23
Sox2P48432 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.61□□□□□ -0.23
Sox2P48432 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Sox2P48432 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sox2P48432 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Sox2P48432 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.61□□□□□ -0.23
Sox2P48432 Gm5682-201ENSMUST00000173402 505 ntBASIC13.61□□□□□ -0.23
Sox2P48432 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sox2P48432 Mir7071-201ENSMUST00000184847 69 ntBASIC13.61□□□□□ -0.23
Sox2P48432 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Sox2P48432 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Sox2P48432 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox2P48432 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.6□□□□□ -0.23
Sox2P48432 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sox2P48432 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.6□□□□□ -0.23
Sox2P48432 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.6□□□□□ -0.23
Sox2P48432 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Sox2P48432 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Gm13836-201ENSMUST00000121159 501 ntBASIC13.6□□□□□ -0.23
Sox2P48432 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sox2P48432 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.6□□□□□ -0.23
Sox2P48432 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.6□□□□□ -0.23
Sox2P48432 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Sox2P48432 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.6□□□□□ -0.23
Sox2P48432 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox2P48432 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Sox2P48432 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.59□□□□□ -0.23
Sox2P48432 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox2P48432 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sox2P48432 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox2P48432 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox2P48432 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.59□□□□□ -0.23
Sox2P48432 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox2P48432 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox2P48432 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox2P48432 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox2P48432 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sox2P48432 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox2P48432 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.59□□□□□ -0.23
Sox2P48432 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox2P48432 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox2P48432 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox2P48432 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.59□□□□□ -0.23
Sox2P48432 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox2P48432 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms