Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TfamP40630 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.07□□□□□ -0.16
TfamP40630 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.07□□□□□ -0.16
TfamP40630 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.07□□□□□ -0.16
TfamP40630 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Gm13597-201ENSMUST00000121239 375 ntBASIC14.07□□□□□ -0.16
TfamP40630 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.07□□□□□ -0.16
TfamP40630 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.07□□□□□ -0.16
TfamP40630 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.07□□□□□ -0.16
TfamP40630 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TfamP40630 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TfamP40630 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.06□□□□□ -0.16
TfamP40630 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TfamP40630 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.06□□□□□ -0.16
TfamP40630 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.06□□□□□ -0.16
TfamP40630 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.06□□□□□ -0.16
TfamP40630 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TfamP40630 Gm2651-201ENSMUST00000203560 838 ntBASIC14.06□□□□□ -0.16
TfamP40630 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.06□□□□□ -0.16
TfamP40630 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.06□□□□□ -0.16
TfamP40630 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.06□□□□□ -0.16
TfamP40630 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.06□□□□□ -0.16
TfamP40630 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.06□□□□□ -0.16
TfamP40630 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TfamP40630 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TfamP40630 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TfamP40630 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.05□□□□□ -0.16
TfamP40630 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TfamP40630 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TfamP40630 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TfamP40630 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
TfamP40630 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
TfamP40630 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TfamP40630 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TfamP40630 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.05□□□□□ -0.16
TfamP40630 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.05□□□□□ -0.16
TfamP40630 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TfamP40630 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.05□□□□□ -0.16
TfamP40630 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TfamP40630 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TfamP40630 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TfamP40630 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TfamP40630 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.05□□□□□ -0.16
TfamP40630 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.05□□□□□ -0.16
TfamP40630 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms