Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.84□□□□□ -0.03
Cxcl12P40224 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cxcl12P40224 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 Gm5187-201ENSMUST00000117317 991 ntBASIC14.84□□□□□ -0.03
Cxcl12P40224 Gm12384-201ENSMUST00000119228 919 ntBASIC14.84□□□□□ -0.03
Cxcl12P40224 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.84□□□□□ -0.03
Cxcl12P40224 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cxcl12P40224 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.84□□□□□ -0.03
Cxcl12P40224 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Cxcl12P40224 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcl12P40224 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cxcl12P40224 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cxcl12P40224 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cxcl12P40224 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cxcl12P40224 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cxcl12P40224 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cxcl12P40224 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.83□□□□□ -0.04
Cxcl12P40224 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.83□□□□□ -0.04
Cxcl12P40224 Gm18905-201ENSMUST00000205454 928 ntBASIC14.83□□□□□ -0.04
Cxcl12P40224 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Gm40466-201ENSMUST00000212174 422 ntBASIC14.83□□□□□ -0.04
Cxcl12P40224 Gm6013-201ENSMUST00000212264 699 ntBASIC14.83□□□□□ -0.04
Cxcl12P40224 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.83□□□□□ -0.04
Cxcl12P40224 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Cxcl12P40224 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Cxcl12P40224 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcl12P40224 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcl12P40224 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcl12P40224 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcl12P40224 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcl12P40224 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cxcl12P40224 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cxcl12P40224 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcl12P40224 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcl12P40224 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcl12P40224 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.82□□□□□ -0.04
Cxcl12P40224 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.82□□□□□ -0.04
Cxcl12P40224 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cxcl12P40224 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.82□□□□□ -0.04
Cxcl12P40224 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcl12P40224 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcl12P40224 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcl12P40224 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcl12P40224 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcl12P40224 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcl12P40224 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcl12P40224 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcl12P40224 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcl12P40224 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcl12P40224 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcl12P40224 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cxcl12P40224 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cxcl12P40224 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcl12P40224 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cxcl12P40224 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms