Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Timp3P39876 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Timp3P39876 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Timp3P39876 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Timp3P39876 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Timp3P39876 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.92□□□□□ -0.5
Timp3P39876 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.92□□□□□ -0.5
Timp3P39876 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Timp3P39876 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Timp3P39876 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.92□□□□□ -0.5
Timp3P39876 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Timp3P39876 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Timp3P39876 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.91□□□□□ -0.5
Timp3P39876 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Timp3P39876 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.91□□□□□ -0.5
Timp3P39876 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.91□□□□□ -0.5
Timp3P39876 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.91□□□□□ -0.5
Timp3P39876 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.91□□□□□ -0.5
Timp3P39876 Gm6973-201ENSMUST00000117080 721 ntBASIC11.91□□□□□ -0.5
Timp3P39876 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Gm7774-201ENSMUST00000200064 533 ntBASIC11.91□□□□□ -0.5
Timp3P39876 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.91□□□□□ -0.5
Timp3P39876 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.91□□□□□ -0.5
Timp3P39876 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.91□□□□□ -0.5
Timp3P39876 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Timp3P39876 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Timp3P39876 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.91□□□□□ -0.5
Timp3P39876 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Timp3P39876 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Timp3P39876 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Timp3P39876 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Timp3P39876 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Timp3P39876 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Timp3P39876 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Timp3P39876 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
Timp3P39876 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.9□□□□□ -0.5
Timp3P39876 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Timp3P39876 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Timp3P39876 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Timp3P39876 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Timp3P39876 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Timp3P39876 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Timp3P39876 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Timp3P39876 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.9□□□□□ -0.5
Timp3P39876 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Timp3P39876 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Timp3P39876 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.9□□□□□ -0.5
Timp3P39876 Gm25948-201ENSMUST00000175334 112 ntBASIC11.9□□□□□ -0.5
Timp3P39876 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.9□□□□□ -0.5
Timp3P39876 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Timp3P39876 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Timp3P39876 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Timp3P39876 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.9□□□□□ -0.5
Timp3P39876 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Timp3P39876 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.9□□□□□ -0.5
Timp3P39876 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Timp3P39876 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Timp3P39876 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Timp3P39876 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Timp3P39876 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Timp3P39876 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Timp3P39876 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Timp3P39876 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.9□□□□□ -0.5
Timp3P39876 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms