Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RetP35546 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.61□□□□□ -0.23
RetP35546 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.61□□□□□ -0.23
RetP35546 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RetP35546 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.61□□□□□ -0.23
RetP35546 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.61□□□□□ -0.23
RetP35546 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.61□□□□□ -0.23
RetP35546 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.61□□□□□ -0.23
RetP35546 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RetP35546 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RetP35546 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RetP35546 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RetP35546 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RetP35546 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RetP35546 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
RetP35546 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RetP35546 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RetP35546 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RetP35546 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RetP35546 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RetP35546 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.6□□□□□ -0.23
RetP35546 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
RetP35546 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.6□□□□□ -0.23
RetP35546 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
RetP35546 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RetP35546 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.6□□□□□ -0.23
RetP35546 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.6□□□□□ -0.23
RetP35546 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.6□□□□□ -0.23
RetP35546 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RetP35546 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
RetP35546 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
RetP35546 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.6□□□□□ -0.23
RetP35546 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.6□□□□□ -0.23
RetP35546 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.6□□□□□ -0.23
RetP35546 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.6□□□□□ -0.23
RetP35546 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RetP35546 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RetP35546 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RetP35546 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
RetP35546 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.59□□□□□ -0.23
RetP35546 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
RetP35546 Gm11424-201ENSMUST00000121929 829 ntBASIC13.59□□□□□ -0.23
RetP35546 Gm5866-201ENSMUST00000177881 973 ntBASIC13.59□□□□□ -0.23
RetP35546 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 Gm27437-201ENSMUST00000183429 107 ntBASIC13.59□□□□□ -0.23
RetP35546 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.59□□□□□ -0.23
RetP35546 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.59□□□□□ -0.23
RetP35546 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.59□□□□□ -0.23
RetP35546 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.59□□□□□ -0.23
RetP35546 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.59□□□□□ -0.23
RetP35546 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RetP35546 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RetP35546 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
RetP35546 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
RetP35546 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RetP35546 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
RetP35546 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.58□□□□□ -0.24
RetP35546 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RetP35546 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms