Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.36□□□□□ -0.27
Sftpa1P35242 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Gm12585-201ENSMUST00000117307 290 ntBASIC13.36□□□□□ -0.27
Sftpa1P35242 Gm8749-201ENSMUST00000117737 331 ntBASIC13.36□□□□□ -0.27
Sftpa1P35242 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.36□□□□□ -0.27
Sftpa1P35242 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.36□□□□□ -0.27
Sftpa1P35242 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sftpa1P35242 Gm33320-201ENSMUST00000192232 530 ntBASIC13.36□□□□□ -0.27
Sftpa1P35242 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.36□□□□□ -0.27
Sftpa1P35242 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sftpa1P35242 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.36□□□□□ -0.27
Sftpa1P35242 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sftpa1P35242 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sftpa1P35242 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.36□□□□□ -0.27
Sftpa1P35242 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sftpa1P35242 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sftpa1P35242 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sftpa1P35242 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sftpa1P35242 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sftpa1P35242 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sftpa1P35242 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sftpa1P35242 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sftpa1P35242 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sftpa1P35242 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sftpa1P35242 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sftpa1P35242 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Sftpa1P35242 Gm15393-201ENSMUST00000120499 219 ntBASIC13.35□□□□□ -0.27
Sftpa1P35242 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sftpa1P35242 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.35□□□□□ -0.27
Sftpa1P35242 Olfr286-202ENSMUST00000205305 969 ntBASIC13.35□□□□□ -0.27
Sftpa1P35242 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Sftpa1P35242 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sftpa1P35242 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Sftpa1P35242 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.35□□□□□ -0.27
Sftpa1P35242 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.35□□□□□ -0.27
Sftpa1P35242 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sftpa1P35242 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sftpa1P35242 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sftpa1P35242 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sftpa1P35242 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sftpa1P35242 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.35□□□□□ -0.27
Sftpa1P35242 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sftpa1P35242 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sftpa1P35242 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sftpa1P35242 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.34□□□□□ -0.27
Sftpa1P35242 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Sftpa1P35242 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Sftpa1P35242 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 Gm12742-201ENSMUST00000117326 410 ntBASIC13.34□□□□□ -0.27
Sftpa1P35242 Gm12957-201ENSMUST00000117835 377 ntBASIC13.34□□□□□ -0.27
Sftpa1P35242 Gm15460-201ENSMUST00000118147 391 ntBASIC13.34□□□□□ -0.27
Sftpa1P35242 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 Gm5354-201ENSMUST00000182417 973 ntBASIC13.34□□□□□ -0.27
Sftpa1P35242 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.34□□□□□ -0.27
Sftpa1P35242 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.34□□□□□ -0.27
Sftpa1P35242 AA619741-201ENSMUST00000195095 646 ntBASIC13.34□□□□□ -0.27
Sftpa1P35242 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.34□□□□□ -0.27
Sftpa1P35242 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.34□□□□□ -0.27
Sftpa1P35242 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.34□□□□□ -0.27
Sftpa1P35242 Gm9182-201ENSMUST00000217829 639 ntBASIC13.34□□□□□ -0.27
Sftpa1P35242 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.34□□□□□ -0.27
Sftpa1P35242 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Sftpa1P35242 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sftpa1P35242 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Sftpa1P35242 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms