Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Mmp13P33435 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp13P33435 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp13P33435 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp13P33435 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp13P33435 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Mmp13P33435 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp13P33435 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Mmp13P33435 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp13P33435 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Mmp13P33435 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp13P33435 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.87□□□□□ -0.03
Mmp13P33435 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp13P33435 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp13P33435 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.87□□□□□ -0.03
Mmp13P33435 Mir3113-201ENSMUST00000175478 76 ntBASIC14.87□□□□□ -0.03
Mmp13P33435 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.87□□□□□ -0.03
Mmp13P33435 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.87□□□□□ -0.03
Mmp13P33435 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.87□□□□□ -0.03
Mmp13P33435 Gm18246-201ENSMUST00000221023 728 ntBASIC14.87□□□□□ -0.03
Mmp13P33435 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp13P33435 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.87□□□□□ -0.03
Mmp13P33435 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp13P33435 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp13P33435 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp13P33435 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp13P33435 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp13P33435 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp13P33435 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.87□□□□□ -0.03
Mmp13P33435 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp13P33435 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Mmp13P33435 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp13P33435 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp13P33435 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mmp13P33435 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp13P33435 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp13P33435 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Mmp13P33435 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp13P33435 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp13P33435 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp13P33435 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.86□□□□□ -0.03
Mmp13P33435 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Mmp13P33435 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp13P33435 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.86□□□□□ -0.03
Mmp13P33435 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp13P33435 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp13P33435 Mir8117-201ENSMUST00000184773 107 ntBASIC14.86□□□□□ -0.03
Mmp13P33435 Gm37935-201ENSMUST00000192012 982 ntBASIC14.86□□□□□ -0.03
Mmp13P33435 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.86□□□□□ -0.03
Mmp13P33435 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.86□□□□□ -0.03
Mmp13P33435 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.86□□□□□ -0.03
Mmp13P33435 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.86□□□□□ -0.03
Mmp13P33435 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp13P33435 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp13P33435 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Mmp13P33435 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp13P33435 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp13P33435 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp13P33435 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Mmp13P33435 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp13P33435 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.86□□□□□ -0.03
Mmp13P33435 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mmp13P33435 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.85□□□□□ -0.03
Mmp13P33435 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.85□□□□□ -0.03
Mmp13P33435 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.85□□□□□ -0.03
Mmp13P33435 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Mmp13P33435 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
Mmp13P33435 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp13P33435 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp13P33435 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp13P33435 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp13P33435 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.84□□□□□ -0.03
Mmp13P33435 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp13P33435 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp13P33435 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp13P33435 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp13P33435 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Mmp13P33435 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Mmp13P33435 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp13P33435 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp13P33435 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp13P33435 Gm17271-201ENSMUST00000165535 355 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms