Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm7506-201ENSMUST00000207758 815 ntBASIC11.48□□□□□ -0.57
Rom1P32958 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Rom1P32958 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.48□□□□□ -0.57
Rom1P32958 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.48□□□□□ -0.57
Rom1P32958 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rom1P32958 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Rom1P32958 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Rom1P32958 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rom1P32958 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rom1P32958 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.47□□□□□ -0.57
Rom1P32958 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rom1P32958 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.47□□□□□ -0.57
Rom1P32958 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.47□□□□□ -0.57
Rom1P32958 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Gm8097-201ENSMUST00000117903 829 ntBASIC11.47□□□□□ -0.57
Rom1P32958 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.47□□□□□ -0.57
Rom1P32958 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Rom1P32958 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Gm29518-201ENSMUST00000190858 372 ntBASIC11.47□□□□□ -0.57
Rom1P32958 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.47□□□□□ -0.57
Rom1P32958 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rom1P32958 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rom1P32958 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rom1P32958 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rom1P32958 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Rom1P32958 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.46□□□□□ -0.57
Rom1P32958 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.46□□□□□ -0.57
Rom1P32958 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.46□□□□□ -0.57
Rom1P32958 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.46□□□□□ -0.57
Rom1P32958 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 AC153881.2-201ENSMUST00000214877 204 ntBASIC11.46□□□□□ -0.57
Rom1P32958 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rom1P32958 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rom1P32958 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Rom1P32958 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rom1P32958 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rom1P32958 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rom1P32958 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms