Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a11P31650 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Slc6a11P31650 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a11P31650 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a11P31650 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.8□□□□□ -0.2
Slc6a11P31650 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a11P31650 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a11P31650 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a11P31650 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a11P31650 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a11P31650 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a11P31650 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a11P31650 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a11P31650 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Slc6a11P31650 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a11P31650 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a11P31650 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a11P31650 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc6a11P31650 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Slc6a11P31650 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.79□□□□□ -0.2
Slc6a11P31650 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.79□□□□□ -0.2
Slc6a11P31650 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.79□□□□□ -0.2
Slc6a11P31650 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.79□□□□□ -0.2
Slc6a11P31650 Gm9682-201ENSMUST00000197505 556 ntBASIC13.79□□□□□ -0.2
Slc6a11P31650 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.79□□□□□ -0.2
Slc6a11P31650 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.79□□□□□ -0.2
Slc6a11P31650 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.79□□□□□ -0.2
Slc6a11P31650 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Slc6a11P31650 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Slc6a11P31650 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.79□□□□□ -0.2
Slc6a11P31650 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Slc6a11P31650 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Slc6a11P31650 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Slc6a11P31650 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Slc6a11P31650 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Slc6a11P31650 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Slc6a11P31650 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Slc6a11P31650 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Slc6a11P31650 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Slc6a11P31650 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.79□□□□□ -0.2
Slc6a11P31650 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Slc6a11P31650 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a11P31650 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a11P31650 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.78□□□□□ -0.2
Slc6a11P31650 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.78□□□□□ -0.2
Slc6a11P31650 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a11P31650 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a11P31650 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a11P31650 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a11P31650 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a11P31650 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Slc6a11P31650 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a11P31650 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a11P31650 Gm5682-201ENSMUST00000173402 505 ntBASIC13.78□□□□□ -0.2
Slc6a11P31650 Gm8396-201ENSMUST00000057361 823 ntBASIC13.78□□□□□ -0.2
Slc6a11P31650 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a11P31650 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Slc6a11P31650 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a11P31650 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a11P31650 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a11P31650 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc6a11P31650 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Slc6a11P31650 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Slc6a11P31650 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Slc6a11P31650 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a11P31650 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a11P31650 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a11P31650 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a11P31650 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Slc6a11P31650 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Slc6a11P31650 Mir6956-201ENSMUST00000183598 62 ntBASIC13.77□□□□□ -0.21
Slc6a11P31650 Gm37153-201ENSMUST00000193637 231 ntBASIC13.77□□□□□ -0.21
Slc6a11P31650 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a11P31650 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a11P31650 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.77□□□□□ -0.21
Slc6a11P31650 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.77□□□□□ -0.21
Slc6a11P31650 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc6a11P31650 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Slc6a11P31650 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms