Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hoxc11P31313 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.09□□□□□ -0.15
Hoxc11P31313 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.09□□□□□ -0.15
Hoxc11P31313 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hoxc11P31313 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Hoxc11P31313 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Hoxc11P31313 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.08□□□□□ -0.15
Hoxc11P31313 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc11P31313 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc11P31313 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc11P31313 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc11P31313 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc11P31313 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc11P31313 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc11P31313 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc11P31313 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc11P31313 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc11P31313 Gm6415-201ENSMUST00000118488 348 ntBASIC14.08□□□□□ -0.16
Hoxc11P31313 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc11P31313 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.08□□□□□ -0.16
Hoxc11P31313 Gm18049-201ENSMUST00000208909 581 ntBASIC14.08□□□□□ -0.16
Hoxc11P31313 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.08□□□□□ -0.16
Hoxc11P31313 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc11P31313 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc11P31313 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.08□□□□□ -0.16
Hoxc11P31313 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.08□□□□□ -0.16
Hoxc11P31313 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc11P31313 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.08□□□□□ -0.16
Hoxc11P31313 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc11P31313 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Hoxc11P31313 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc11P31313 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Hoxc11P31313 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Hoxc11P31313 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc11P31313 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc11P31313 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc11P31313 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc11P31313 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc11P31313 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc11P31313 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc11P31313 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.07□□□□□ -0.16
Hoxc11P31313 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc11P31313 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc11P31313 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc11P31313 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc11P31313 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc11P31313 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.07□□□□□ -0.16
Hoxc11P31313 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.07□□□□□ -0.16
Hoxc11P31313 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.07□□□□□ -0.16
Hoxc11P31313 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.07□□□□□ -0.16
Hoxc11P31313 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc11P31313 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc11P31313 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc11P31313 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc11P31313 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc11P31313 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Hoxc11P31313 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc11P31313 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc11P31313 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc11P31313 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc11P31313 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.06□□□□□ -0.16
Hoxc11P31313 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Gm27321-201ENSMUST00000185021 205 ntBASIC14.06□□□□□ -0.16
Hoxc11P31313 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.06□□□□□ -0.16
Hoxc11P31313 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc11P31313 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.05□□□□□ -0.16
Hoxc11P31313 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxc11P31313 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms