Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl1P12850 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.03□□□□□ -0.48
Cxcl1P12850 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.03□□□□□ -0.48
Cxcl1P12850 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.03□□□□□ -0.48
Cxcl1P12850 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl1P12850 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.03□□□□□ -0.48
Cxcl1P12850 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl1P12850 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
Cxcl1P12850 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Cxcl1P12850 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.03□□□□□ -0.48
Cxcl1P12850 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.03□□□□□ -0.48
Cxcl1P12850 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl1P12850 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.48
Cxcl1P12850 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Cxcl1P12850 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Cxcl1P12850 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl1P12850 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl1P12850 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl1P12850 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl1P12850 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl1P12850 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl1P12850 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Cxcl1P12850 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl1P12850 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl1P12850 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl1P12850 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl1P12850 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cxcl1P12850 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.02□□□□□ -0.49
Cxcl1P12850 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.02□□□□□ -0.49
Cxcl1P12850 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl1P12850 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.02□□□□□ -0.49
Cxcl1P12850 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.02□□□□□ -0.49
Cxcl1P12850 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.02□□□□□ -0.49
Cxcl1P12850 Olfr286-202ENSMUST00000205305 969 ntBASIC12.02□□□□□ -0.49
Cxcl1P12850 Gm45167-201ENSMUST00000208007 322 ntBASIC12.02□□□□□ -0.49
Cxcl1P12850 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Cxcl1P12850 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl1P12850 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl1P12850 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl1P12850 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.02□□□□□ -0.49
Cxcl1P12850 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl1P12850 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.02□□□□□ -0.49
Cxcl1P12850 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl1P12850 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl1P12850 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl1P12850 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl1P12850 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.02□□□□□ -0.49
Cxcl1P12850 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.02□□□□□ -0.49
Cxcl1P12850 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl1P12850 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.02□□□□□ -0.49
Cxcl1P12850 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl1P12850 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl1P12850 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl1P12850 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl1P12850 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.01□□□□□ -0.49
Cxcl1P12850 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cxcl1P12850 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cxcl1P12850 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.01□□□□□ -0.49
Cxcl1P12850 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.01□□□□□ -0.49
Cxcl1P12850 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cxcl1P12850 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.01□□□□□ -0.49
Cxcl1P12850 Gm2451-201ENSMUST00000199447 999 ntBASIC12.01□□□□□ -0.49
Cxcl1P12850 Gm10290-201ENSMUST00000200451 999 ntBASIC12.01□□□□□ -0.49
Cxcl1P12850 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.01□□□□□ -0.49
Cxcl1P12850 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.01□□□□□ -0.49
Cxcl1P12850 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms