Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UbbP0CG49 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UbbP0CG49 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UbbP0CG49 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
UbbP0CG49 Gm6089-201ENSMUST00000197666 938 ntBASIC12.64□□□□□ -0.39
UbbP0CG49 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.64□□□□□ -0.39
UbbP0CG49 Gm18669-201ENSMUST00000216049 778 ntBASIC12.64□□□□□ -0.39
UbbP0CG49 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UbbP0CG49 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UbbP0CG49 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UbbP0CG49 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UbbP0CG49 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UbbP0CG49 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UbbP0CG49 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UbbP0CG49 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
UbbP0CG49 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UbbP0CG49 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UbbP0CG49 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UbbP0CG49 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UbbP0CG49 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.64□□□□□ -0.39
UbbP0CG49 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UbbP0CG49 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UbbP0CG49 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UbbP0CG49 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UbbP0CG49 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.63□□□□□ -0.39
UbbP0CG49 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
UbbP0CG49 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.63□□□□□ -0.39
UbbP0CG49 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
UbbP0CG49 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
UbbP0CG49 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.63□□□□□ -0.39
UbbP0CG49 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
UbbP0CG49 Gm13418-201ENSMUST00000119097 944 ntBASIC12.63□□□□□ -0.39
UbbP0CG49 Gm11764-201ENSMUST00000120221 623 ntBASIC12.63□□□□□ -0.39
UbbP0CG49 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
UbbP0CG49 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.63□□□□□ -0.39
UbbP0CG49 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.63□□□□□ -0.39
UbbP0CG49 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.63□□□□□ -0.39
UbbP0CG49 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
UbbP0CG49 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.63□□□□□ -0.39
UbbP0CG49 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
UbbP0CG49 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
UbbP0CG49 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UbbP0CG49 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
UbbP0CG49 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.62□□□□□ -0.39
UbbP0CG49 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
UbbP0CG49 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.62□□□□□ -0.39
UbbP0CG49 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
UbbP0CG49 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.62□□□□□ -0.39
UbbP0CG49 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.62□□□□□ -0.39
UbbP0CG49 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.62□□□□□ -0.39
UbbP0CG49 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UbbP0CG49 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
UbbP0CG49 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms