Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm5186-201ENSMUST00000218781 920 ntBASIC21.52■■□□□ 1.04
NclP09405 Dupd1-202ENSMUST00000224735 548 ntBASIC21.52■■□□□ 1.04
NclP09405 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NclP09405 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NclP09405 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NclP09405 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
NclP09405 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NclP09405 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NclP09405 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
NclP09405 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
NclP09405 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NclP09405 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NclP09405 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NclP09405 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC21.51■■□□□ 1.03
NclP09405 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NclP09405 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
NclP09405 Gm14780-201ENSMUST00000118387 2737 ntBASIC21.51■■□□□ 1.03
NclP09405 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NclP09405 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NclP09405 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NclP09405 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC21.51■■□□□ 1.03
NclP09405 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NclP09405 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NclP09405 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NclP09405 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NclP09405 Gm14719-201ENSMUST00000121891 340 ntBASIC21.51■■□□□ 1.03
NclP09405 Gm27838-201ENSMUST00000184829 128 ntBASIC21.51■■□□□ 1.03
NclP09405 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC21.51■■□□□ 1.03
NclP09405 Gm45453-201ENSMUST00000211758 853 ntBASIC21.51■■□□□ 1.03
NclP09405 AC149588.3-201ENSMUST00000227515 150 ntBASIC21.51■■□□□ 1.03
NclP09405 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NclP09405 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NclP09405 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NclP09405 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NclP09405 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NclP09405 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NclP09405 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NclP09405 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NclP09405 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
NclP09405 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NclP09405 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
NclP09405 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NclP09405 Efs-202ENSMUST00000227037 2540 ntBASIC21.5■■□□□ 1.03
NclP09405 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
NclP09405 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC21.5■■□□□ 1.03
NclP09405 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NclP09405 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NclP09405 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NclP09405 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NclP09405 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NclP09405 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NclP09405 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NclP09405 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NclP09405 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
NclP09405 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NclP09405 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NclP09405 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NclP09405 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
NclP09405 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NclP09405 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
NclP09405 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
NclP09405 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
NclP09405 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NclP09405 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
NclP09405 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC21.49■■□□□ 1.03
NclP09405 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC21.49■■□□□ 1.03
NclP09405 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC21.49■■□□□ 1.03
NclP09405 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
NclP09405 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NclP09405 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC21.49■■□□□ 1.03
NclP09405 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NclP09405 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC21.49■■□□□ 1.03
NclP09405 Gm46209-201ENSMUST00000217912 553 ntBASIC21.49■■□□□ 1.03
NclP09405 AC132863.2-201ENSMUST00000226643 799 ntBASIC21.49■■□□□ 1.03
NclP09405 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NclP09405 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NclP09405 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
NclP09405 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NclP09405 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NclP09405 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NclP09405 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NclP09405 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NclP09405 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
NclP09405 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NclP09405 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
NclP09405 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
NclP09405 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NclP09405 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
NclP09405 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
NclP09405 Gm4204-201ENSMUST00000110798 1231 ntBASIC21.48■■□□□ 1.03
NclP09405 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
NclP09405 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NclP09405 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
NclP09405 Arhgef33-209ENSMUST00000225223 714 ntBASIC21.48■■□□□ 1.03
NclP09405 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NclP09405 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NclP09405 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NclP09405 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NclP09405 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NclP09405 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms