Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm10355-201ENSMUST00000097146 517 ntBASIC13.74□□□□□ -0.21
ApoeP08226 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ApoeP08226 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.74□□□□□ -0.21
ApoeP08226 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
ApoeP08226 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ApoeP08226 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
ApoeP08226 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
ApoeP08226 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
ApoeP08226 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
ApoeP08226 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.73□□□□□ -0.21
ApoeP08226 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
ApoeP08226 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
ApoeP08226 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
ApoeP08226 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.73□□□□□ -0.21
ApoeP08226 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ApoeP08226 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ApoeP08226 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.72□□□□□ -0.21
ApoeP08226 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.72□□□□□ -0.21
ApoeP08226 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.72□□□□□ -0.21
ApoeP08226 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ApoeP08226 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.72□□□□□ -0.21
ApoeP08226 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
ApoeP08226 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.72□□□□□ -0.21
ApoeP08226 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ApoeP08226 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
ApoeP08226 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Matn2-206ENSMUST00000228570 2798 ntBASIC13.72□□□□□ -0.21
ApoeP08226 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.72□□□□□ -0.21
ApoeP08226 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ApoeP08226 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
ApoeP08226 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
ApoeP08226 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ApoeP08226 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ApoeP08226 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
ApoeP08226 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ApoeP08226 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ApoeP08226 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ApoeP08226 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ApoeP08226 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ApoeP08226 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms