Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC18.52■□□□□ 0.55
Ubr1O70481 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC18.52■□□□□ 0.55
Ubr1O70481 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ubr1O70481 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ubr1O70481 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC18.52■□□□□ 0.55
Ubr1O70481 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC18.52■□□□□ 0.55
Ubr1O70481 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr1O70481 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr1O70481 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr1O70481 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr1O70481 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr1O70481 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr1O70481 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr1O70481 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr1O70481 Gm13392-201ENSMUST00000117708 150 ntBASIC18.51■□□□□ 0.55
Ubr1O70481 Gm11557-201ENSMUST00000120200 1008 ntBASIC18.51■□□□□ 0.55
Ubr1O70481 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr1O70481 Mir1938-201ENSMUST00000158746 100 ntBASIC18.51■□□□□ 0.55
Ubr1O70481 Gm8927-201ENSMUST00000181978 981 ntBASIC18.51■□□□□ 0.55
Ubr1O70481 Gm29741-201ENSMUST00000192667 421 ntBASIC18.51■□□□□ 0.55
Ubr1O70481 Gm5276-201ENSMUST00000196683 1047 ntBASIC18.51■□□□□ 0.55
Ubr1O70481 Gm7287-201ENSMUST00000205267 602 ntBASIC18.51■□□□□ 0.55
Ubr1O70481 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC18.51■□□□□ 0.55
Ubr1O70481 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr1O70481 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr1O70481 Gm3222-201ENSMUST00000071282 990 ntBASIC18.51■□□□□ 0.55
Ubr1O70481 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ubr1O70481 Gm13859-201ENSMUST00000119936 1423 ntBASIC18.51■□□□□ 0.55
Ubr1O70481 Gm9816-201ENSMUST00000122292 1414 ntBASIC18.51■□□□□ 0.55
Ubr1O70481 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ubr1O70481 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr1O70481 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
Ubr1O70481 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr1O70481 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr1O70481 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ubr1O70481 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr1O70481 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ubr1O70481 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr1O70481 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubr1O70481 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr1O70481 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr1O70481 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC18.5■□□□□ 0.55
Ubr1O70481 Gm8652-201ENSMUST00000181363 964 ntBASIC18.5■□□□□ 0.55
Ubr1O70481 AC114008.2-201ENSMUST00000227699 1347 ntBASIC18.5■□□□□ 0.55
Ubr1O70481 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC18.5■□□□□ 0.55
Ubr1O70481 Fbxl12-205ENSMUST00000140702 1555 ntBASIC18.5■□□□□ 0.55
Ubr1O70481 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr1O70481 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr1O70481 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC18.5■□□□□ 0.55
Ubr1O70481 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr1O70481 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr1O70481 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr1O70481 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.5■□□□□ 0.55
Ubr1O70481 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr1O70481 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr1O70481 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr1O70481 Gm44799-201ENSMUST00000207639 1202 ntBASIC18.5■□□□□ 0.55
Ubr1O70481 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr1O70481 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr1O70481 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ubr1O70481 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubr1O70481 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr1O70481 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr1O70481 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr1O70481 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr1O70481 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.49■□□□□ 0.55
Ubr1O70481 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr1O70481 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr1O70481 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr1O70481 Gm12957-201ENSMUST00000117835 377 ntBASIC18.49■□□□□ 0.55
Ubr1O70481 Gm13612-201ENSMUST00000119276 390 ntBASIC18.49■□□□□ 0.55
Ubr1O70481 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr1O70481 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC18.49■□□□□ 0.55
Ubr1O70481 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr1O70481 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC18.49■□□□□ 0.55
Ubr1O70481 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC18.49■□□□□ 0.55
Ubr1O70481 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr1O70481 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr1O70481 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr1O70481 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr1O70481 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr1O70481 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr1O70481 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr1O70481 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Ubr1O70481 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr1O70481 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr1O70481 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr1O70481 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr1O70481 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC18.48■□□□□ 0.55
Ubr1O70481 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr1O70481 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr1O70481 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr1O70481 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr1O70481 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.48■□□□□ 0.55
Ubr1O70481 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr1O70481 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr1O70481 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr1O70481 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr1O70481 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr1O70481 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms