Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim1O70400 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim1O70400 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pdlim1O70400 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pdlim1O70400 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Pdlim1O70400 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pdlim1O70400 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pdlim1O70400 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Pdlim1O70400 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pdlim1O70400 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pdlim1O70400 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pdlim1O70400 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.33□□□□□ -0.12
Pdlim1O70400 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 Gm12134-201ENSMUST00000122109 520 ntBASIC14.33□□□□□ -0.12
Pdlim1O70400 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.33□□□□□ -0.12
Pdlim1O70400 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pdlim1O70400 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pdlim1O70400 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.33□□□□□ -0.12
Pdlim1O70400 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Pdlim1O70400 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdlim1O70400 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim1O70400 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim1O70400 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim1O70400 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim1O70400 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim1O70400 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim1O70400 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pdlim1O70400 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim1O70400 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pdlim1O70400 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim1O70400 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pdlim1O70400 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim1O70400 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pdlim1O70400 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm15693-201ENSMUST00000120470 637 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim1O70400 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim1O70400 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm29310-201ENSMUST00000185468 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm21825-201ENSMUST00000185728 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm29109-201ENSMUST00000185895 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm21896-201ENSMUST00000186520 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm21873-201ENSMUST00000186728 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm21794-201ENSMUST00000187056 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm21880-201ENSMUST00000187275 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm21826-201ENSMUST00000187451 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm21198-201ENSMUST00000188393 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm21749-201ENSMUST00000189343 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm21901-201ENSMUST00000189568 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm29424-201ENSMUST00000189716 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm28599-201ENSMUST00000189838 694 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm21867-201ENSMUST00000189917 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm29269-201ENSMUST00000190087 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm21722-201ENSMUST00000190153 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm28423-201ENSMUST00000190701 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm21899-201ENSMUST00000190745 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm21910-201ENSMUST00000191163 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm21849-201ENSMUST00000191571 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm28678-201ENSMUST00000191593 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm20910-201ENSMUST00000193268 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm21871-201ENSMUST00000194621 696 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm7774-201ENSMUST00000200064 533 ntBASIC14.32□□□□□ -0.12
Pdlim1O70400 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Pdlim1O70400 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim1O70400 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim1O70400 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pdlim1O70400 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim1O70400 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.32□□□□□ -0.12
Pdlim1O70400 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim1O70400 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim1O70400 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim1O70400 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pdlim1O70400 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdlim1O70400 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Pdlim1O70400 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim1O70400 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pdlim1O70400 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim1O70400 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim1O70400 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim1O70400 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim1O70400 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdlim1O70400 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.31□□□□□ -0.12
Pdlim1O70400 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms