Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.92■□□□□ 0.14
Trdmt1O55055 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trdmt1O55055 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trdmt1O55055 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.92■□□□□ 0.14
Trdmt1O55055 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trdmt1O55055 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trdmt1O55055 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.91■□□□□ 0.14
Trdmt1O55055 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.91■□□□□ 0.14
Trdmt1O55055 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.91■□□□□ 0.14
Trdmt1O55055 Gm9002-201ENSMUST00000178437 499 ntBASIC15.91■□□□□ 0.14
Trdmt1O55055 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Mir7085-201ENSMUST00000184353 66 ntBASIC15.91■□□□□ 0.14
Trdmt1O55055 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Gm44719-201ENSMUST00000206404 149 ntBASIC15.91■□□□□ 0.14
Trdmt1O55055 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trdmt1O55055 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.91■□□□□ 0.14
Trdmt1O55055 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.91■□□□□ 0.14
Trdmt1O55055 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.91■□□□□ 0.14
Trdmt1O55055 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trdmt1O55055 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trdmt1O55055 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trdmt1O55055 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trdmt1O55055 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.9■□□□□ 0.14
Trdmt1O55055 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trdmt1O55055 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trdmt1O55055 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trdmt1O55055 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trdmt1O55055 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.9■□□□□ 0.14
Trdmt1O55055 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trdmt1O55055 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trdmt1O55055 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.9■□□□□ 0.14
Trdmt1O55055 Gm15678-201ENSMUST00000117573 960 ntBASIC15.9■□□□□ 0.14
Trdmt1O55055 Gm17150-201ENSMUST00000165577 381 ntBASIC15.9■□□□□ 0.14
Trdmt1O55055 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trdmt1O55055 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.9■□□□□ 0.14
Trdmt1O55055 Gm27701-201ENSMUST00000184498 110 ntBASIC15.9■□□□□ 0.14
Trdmt1O55055 Gm5279-201ENSMUST00000199575 745 ntBASIC15.9■□□□□ 0.14
Trdmt1O55055 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.9■□□□□ 0.14
Trdmt1O55055 Gm18062-201ENSMUST00000208020 547 ntBASIC15.9■□□□□ 0.14
Trdmt1O55055 Gm18055-201ENSMUST00000208254 547 ntBASIC15.9■□□□□ 0.14
Trdmt1O55055 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trdmt1O55055 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.9■□□□□ 0.14
Trdmt1O55055 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trdmt1O55055 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trdmt1O55055 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trdmt1O55055 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trdmt1O55055 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.9■□□□□ 0.14
Trdmt1O55055 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trdmt1O55055 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trdmt1O55055 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.9■□□□□ 0.14
Trdmt1O55055 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Trdmt1O55055 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trdmt1O55055 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trdmt1O55055 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trdmt1O55055 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trdmt1O55055 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trdmt1O55055 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trdmt1O55055 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trdmt1O55055 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trdmt1O55055 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.89■□□□□ 0.13
Trdmt1O55055 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trdmt1O55055 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trdmt1O55055 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
Trdmt1O55055 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trdmt1O55055 Gm4804-201ENSMUST00000182234 999 ntBASIC15.89■□□□□ 0.13
Trdmt1O55055 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.89■□□□□ 0.13
Trdmt1O55055 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.89■□□□□ 0.13
Trdmt1O55055 Gm6266-201ENSMUST00000203844 806 ntBASIC15.89■□□□□ 0.13
Trdmt1O55055 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.89■□□□□ 0.13
Trdmt1O55055 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.89■□□□□ 0.13
Trdmt1O55055 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trdmt1O55055 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trdmt1O55055 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trdmt1O55055 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
Trdmt1O55055 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trdmt1O55055 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trdmt1O55055 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trdmt1O55055 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
Trdmt1O55055 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms