Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cntnap1O54991 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Cntnap1O54991 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cntnap1O54991 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cntnap1O54991 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC18.34■□□□□ 0.53
Cntnap1O54991 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cntnap1O54991 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC18.34■□□□□ 0.53
Cntnap1O54991 Gm37922-201ENSMUST00000195596 455 ntBASIC18.34■□□□□ 0.53
Cntnap1O54991 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC18.34■□□□□ 0.53
Cntnap1O54991 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC18.34■□□□□ 0.53
Cntnap1O54991 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cntnap1O54991 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cntnap1O54991 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cntnap1O54991 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cntnap1O54991 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cntnap1O54991 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.34■□□□□ 0.53
Cntnap1O54991 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cntnap1O54991 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cntnap1O54991 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cntnap1O54991 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.34■□□□□ 0.53
Cntnap1O54991 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cntnap1O54991 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cntnap1O54991 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cntnap1O54991 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
Cntnap1O54991 Gm12012-201ENSMUST00000118857 1066 ntBASIC18.33■□□□□ 0.53
Cntnap1O54991 Gm11400-201ENSMUST00000120853 1214 ntBASIC18.33■□□□□ 0.53
Cntnap1O54991 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC18.33■□□□□ 0.53
Cntnap1O54991 Mir1943-201ENSMUST00000158276 73 ntBASIC18.33■□□□□ 0.53
Cntnap1O54991 Mospd4-201ENSMUST00000180618 576 ntBASIC18.33■□□□□ 0.53
Cntnap1O54991 Gm5869-201ENSMUST00000200248 1257 ntBASIC18.33■□□□□ 0.53
Cntnap1O54991 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC18.33■□□□□ 0.53
Cntnap1O54991 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cntnap1O54991 Gm10146-201ENSMUST00000072739 309 ntBASIC18.33■□□□□ 0.53
Cntnap1O54991 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cntnap1O54991 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cntnap1O54991 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cntnap1O54991 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cntnap1O54991 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cntnap1O54991 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cntnap1O54991 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC18.33■□□□□ 0.52
Cntnap1O54991 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Cntnap1O54991 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cntnap1O54991 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cntnap1O54991 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cntnap1O54991 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cntnap1O54991 Gm13730-201ENSMUST00000121036 1462 ntBASIC18.32■□□□□ 0.52
Cntnap1O54991 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC18.32■□□□□ 0.52
Cntnap1O54991 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC18.32■□□□□ 0.52
Cntnap1O54991 Gm27438-201ENSMUST00000183480 110 ntBASIC18.32■□□□□ 0.52
Cntnap1O54991 Gm7467-201ENSMUST00000185173 652 ntBASIC18.32■□□□□ 0.52
Cntnap1O54991 Gm18212-201ENSMUST00000211678 889 ntBASIC18.32■□□□□ 0.52
Cntnap1O54991 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC18.32■□□□□ 0.52
Cntnap1O54991 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cntnap1O54991 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cntnap1O54991 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cntnap1O54991 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.32■□□□□ 0.52
Cntnap1O54991 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cntnap1O54991 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cntnap1O54991 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cntnap1O54991 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cntnap1O54991 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cntnap1O54991 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cntnap1O54991 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cntnap1O54991 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC18.31■□□□□ 0.52
Cntnap1O54991 Gm11331-201ENSMUST00000119764 288 ntBASIC18.31■□□□□ 0.52
Cntnap1O54991 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.31■□□□□ 0.52
Cntnap1O54991 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC18.31■□□□□ 0.52
Cntnap1O54991 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC18.31■□□□□ 0.52
Cntnap1O54991 Gm8546-201ENSMUST00000178288 1264 ntBASIC18.31■□□□□ 0.52
Cntnap1O54991 Mir6927-201ENSMUST00000184494 71 ntBASIC18.31■□□□□ 0.52
Cntnap1O54991 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cntnap1O54991 Ighv1-51-201ENSMUST00000192903 354 ntBASIC18.31■□□□□ 0.52
Cntnap1O54991 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cntnap1O54991 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC18.31■□□□□ 0.52
Cntnap1O54991 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC18.31■□□□□ 0.52
Cntnap1O54991 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cntnap1O54991 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cntnap1O54991 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cntnap1O54991 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cntnap1O54991 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cntnap1O54991 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cntnap1O54991 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.31■□□□□ 0.52
Cntnap1O54991 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cntnap1O54991 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cntnap1O54991 Gm43579-201ENSMUST00000202387 1307 ntBASIC18.31■□□□□ 0.52
Cntnap1O54991 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cntnap1O54991 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cntnap1O54991 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cntnap1O54991 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cntnap1O54991 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cntnap1O54991 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cntnap1O54991 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.3■□□□□ 0.52
Cntnap1O54991 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cntnap1O54991 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cntnap1O54991 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cntnap1O54991 Gm9431-201ENSMUST00000119765 1051 ntBASIC18.3■□□□□ 0.52
Cntnap1O54991 Gm11591-201ENSMUST00000120063 702 ntBASIC18.3■□□□□ 0.52
Cntnap1O54991 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cntnap1O54991 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cntnap1O54991 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms