Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Smarce1O54941 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarce1O54941 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.27■□□□□ 0.35
Smarce1O54941 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC17.27■□□□□ 0.35
Smarce1O54941 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smarce1O54941 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarce1O54941 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarce1O54941 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarce1O54941 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarce1O54941 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.26■□□□□ 0.35
Smarce1O54941 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarce1O54941 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarce1O54941 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarce1O54941 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.26■□□□□ 0.35
Smarce1O54941 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.26■□□□□ 0.35
Smarce1O54941 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.26■□□□□ 0.35
Smarce1O54941 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.26■□□□□ 0.35
Smarce1O54941 Gm17971-201ENSMUST00000190239 806 ntBASIC17.26■□□□□ 0.35
Smarce1O54941 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarce1O54941 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarce1O54941 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Smarce1O54941 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.26■□□□□ 0.35
Smarce1O54941 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarce1O54941 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smarce1O54941 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarce1O54941 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarce1O54941 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarce1O54941 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarce1O54941 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarce1O54941 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smarce1O54941 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarce1O54941 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Smarce1O54941 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.25■□□□□ 0.35
Smarce1O54941 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smarce1O54941 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarce1O54941 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.24■□□□□ 0.35
Smarce1O54941 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Smarce1O54941 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.24■□□□□ 0.35
Smarce1O54941 Gm16026-204ENSMUST00000162652 683 ntBASIC17.24■□□□□ 0.35
Smarce1O54941 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.24■□□□□ 0.35
Smarce1O54941 Gm28659-201ENSMUST00000188013 759 ntBASIC17.24■□□□□ 0.35
Smarce1O54941 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.24■□□□□ 0.35
Smarce1O54941 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.24■□□□□ 0.35
Smarce1O54941 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Smarce1O54941 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smarce1O54941 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.24■□□□□ 0.35
Smarce1O54941 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarce1O54941 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarce1O54941 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Smarce1O54941 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarce1O54941 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarce1O54941 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarce1O54941 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarce1O54941 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smarce1O54941 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
Smarce1O54941 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.23■□□□□ 0.35
Smarce1O54941 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.23■□□□□ 0.35
Smarce1O54941 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarce1O54941 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.23■□□□□ 0.35
Smarce1O54941 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms