Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Ndufa1O35683 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ndufa1O35683 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ndufa1O35683 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.44□□□□□ -0.74
Ndufa1O35683 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ndufa1O35683 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.44□□□□□ -0.74
Ndufa1O35683 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ndufa1O35683 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ndufa1O35683 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ndufa1O35683 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ndufa1O35683 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ndufa1O35683 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Ndufa1O35683 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ndufa1O35683 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ndufa1O35683 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ndufa1O35683 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ndufa1O35683 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.43□□□□□ -0.74
Ndufa1O35683 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ndufa1O35683 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ndufa1O35683 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ndufa1O35683 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ndufa1O35683 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.43□□□□□ -0.74
Ndufa1O35683 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm4609-201ENSMUST00000106443 1002 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm5138-201ENSMUST00000113842 1002 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm15191-201ENSMUST00000117933 1000 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm12182-201ENSMUST00000118655 1008 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm13882-201ENSMUST00000120886 1002 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC10.43□□□□□ -0.74
Ndufa1O35683 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm10284-201ENSMUST00000145057 1005 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm10481-201ENSMUST00000179228 1002 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm2574-201ENSMUST00000181051 1002 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm3200-201ENSMUST00000181493 1002 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm8825-201ENSMUST00000182565 998 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm4518-201ENSMUST00000182638 718 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm8330-201ENSMUST00000182754 1008 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm4575-201ENSMUST00000182991 1002 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm8709-201ENSMUST00000183230 1012 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm27704-201ENSMUST00000185094 107 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm33142-201ENSMUST00000193913 867 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 AC108846.1-201ENSMUST00000214531 513 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 AC158538.1-201ENSMUST00000225870 294 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm10293-201ENSMUST00000076317 1002 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm6316-201ENSMUST00000082064 1020 ntBASIC10.43□□□□□ -0.74
Ndufa1O35683 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Ndufa1O35683 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Ndufa1O35683 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Ndufa1O35683 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa1O35683 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa1O35683 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.42□□□□□ -0.74
Ndufa1O35683 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa1O35683 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa1O35683 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa1O35683 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa1O35683 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa1O35683 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa1O35683 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Ndufa1O35683 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa1O35683 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa1O35683 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms