Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Clk3O35492 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.84□□□□□ -0.19
Clk3O35492 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.84□□□□□ -0.19
Clk3O35492 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Clk3O35492 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Clk3O35492 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Gm14140-201ENSMUST00000119999 995 ntBASIC13.84□□□□□ -0.19
Clk3O35492 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.84□□□□□ -0.19
Clk3O35492 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.84□□□□□ -0.19
Clk3O35492 Gm6443-201ENSMUST00000203599 874 ntBASIC13.84□□□□□ -0.19
Clk3O35492 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.84□□□□□ -0.19
Clk3O35492 Gm18246-201ENSMUST00000221023 728 ntBASIC13.84□□□□□ -0.19
Clk3O35492 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.84□□□□□ -0.19
Clk3O35492 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Clk3O35492 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.84□□□□□ -0.19
Clk3O35492 Psmb5-202ENSMUST00000227257 622 ntBASIC13.84□□□□□ -0.19
Clk3O35492 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.84□□□□□ -0.19
Clk3O35492 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Clk3O35492 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Clk3O35492 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Clk3O35492 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Clk3O35492 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Clk3O35492 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.83□□□□□ -0.19
Clk3O35492 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.83□□□□□ -0.2
Clk3O35492 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.83□□□□□ -0.2
Clk3O35492 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.83□□□□□ -0.2
Clk3O35492 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Clk3O35492 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.83□□□□□ -0.2
Clk3O35492 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Clk3O35492 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.83□□□□□ -0.2
Clk3O35492 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.83□□□□□ -0.2
Clk3O35492 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Clk3O35492 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Clk3O35492 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.83□□□□□ -0.2
Clk3O35492 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.83□□□□□ -0.2
Clk3O35492 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Clk3O35492 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clk3O35492 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clk3O35492 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk3O35492 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk3O35492 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk3O35492 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk3O35492 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk3O35492 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk3O35492 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk3O35492 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clk3O35492 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Clk3O35492 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk3O35492 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk3O35492 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk3O35492 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clk3O35492 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk3O35492 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Clk3O35492 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clk3O35492 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.82□□□□□ -0.2
Clk3O35492 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clk3O35492 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.82□□□□□ -0.2
Clk3O35492 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clk3O35492 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Clk3O35492 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk3O35492 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clk3O35492 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clk3O35492 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms