Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Efnb3O35393 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Efnb3O35393 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Efnb3O35393 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Efnb3O35393 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Efnb3O35393 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.48□□□□□ -0.57
Efnb3O35393 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Efnb3O35393 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Efnb3O35393 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Efnb3O35393 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Efnb3O35393 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Efnb3O35393 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Efnb3O35393 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Efnb3O35393 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Efnb3O35393 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Efnb3O35393 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.48□□□□□ -0.57
Efnb3O35393 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.48□□□□□ -0.57
Efnb3O35393 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Efnb3O35393 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Efnb3O35393 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Efnb3O35393 Gm43347-201ENSMUST00000200226 580 ntBASIC11.48□□□□□ -0.57
Efnb3O35393 Gm34391-201ENSMUST00000203706 907 ntBASIC11.48□□□□□ -0.57
Efnb3O35393 Gm6296-201ENSMUST00000222599 943 ntBASIC11.48□□□□□ -0.57
Efnb3O35393 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.48□□□□□ -0.57
Efnb3O35393 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Efnb3O35393 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Efnb3O35393 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Efnb3O35393 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.48□□□□□ -0.57
Efnb3O35393 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Efnb3O35393 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Efnb3O35393 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Efnb3O35393 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Efnb3O35393 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Efnb3O35393 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Efnb3O35393 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Efnb3O35393 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Efnb3O35393 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.47□□□□□ -0.57
Efnb3O35393 Matn2-206ENSMUST00000228570 2798 ntBASIC11.47□□□□□ -0.57
Efnb3O35393 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.47□□□□□ -0.57
Efnb3O35393 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.47□□□□□ -0.57
Efnb3O35393 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Gm24589-201ENSMUST00000116692 94 ntBASIC11.47□□□□□ -0.57
Efnb3O35393 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.47□□□□□ -0.57
Efnb3O35393 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.47□□□□□ -0.57
Efnb3O35393 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Efnb3O35393 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Efnb3O35393 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Efnb3O35393 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Efnb3O35393 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.46□□□□□ -0.57
Efnb3O35393 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Efnb3O35393 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Efnb3O35393 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Efnb3O35393 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Efnb3O35393 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Efnb3O35393 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Efnb3O35393 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Efnb3O35393 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Efnb3O35393 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Efnb3O35393 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.46□□□□□ -0.57
Efnb3O35393 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Efnb3O35393 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.46□□□□□ -0.57
Efnb3O35393 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Efnb3O35393 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Efnb3O35393 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Efnb3O35393 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Efnb3O35393 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Efnb3O35393 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.46□□□□□ -0.57
Efnb3O35393 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.46□□□□□ -0.57
Efnb3O35393 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.46□□□□□ -0.57
Efnb3O35393 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Efnb3O35393 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Efnb3O35393 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Efnb3O35393 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms